Structure of PDB 8wem Chain A Binding Site BS01
Receptor Information
>8wem Chain A (length=353) Species:
817
(Bacteroides fragilis) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PVTASIDLQSVSYTDLATQLNDVSDFGKMIILKDNGFNRQVHVSMDKRTK
IQLDNENVRLFNGRDKDSTSFILGDEFAVLRFYRNGESISYIAYKEAQMM
NEIAEFYAAPFKKTRAINEKEAFECIYDSRTRSAGKDIVSVKINIDKAKK
ILNLPECDYINDYIKTPQVPSEPKTVYVICLRENGSTIYPNEVSAQMQDA
ANSVYAVHGLKRYVNFHFVLYTTEYSCPSGDAKEGLEGFTASLKSNPKAE
GYDDQIYFLIRWGTWDNKILGMSWFNSYNVNTASDFEASGMSTTQLMYPG
VMAHELGHILGAEHTDNSKDLMYATFTGYLSHLSEKNMDIIAKNLGWEAA
DGD
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
8wem Chain A Residue 401 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8wem
Bacteroides fragilis toxin 1
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
D194 H348 H352 H358
Binding residue
(residue number reindexed from 1)
D162 H304 H308 H314
Annotation score
4
External links
PDB
RCSB:8wem
,
PDBe:8wem
,
PDBj:8wem
PDBsum
8wem
PubMed
UniProt
P54355
|ENTM_BACFG Fragilysin (Gene Name=btfP)
[
Back to BioLiP
]