Structure of PDB 8vsi Chain A Binding Site BS01

Receptor Information

>8vsi Chain A (length=571) Species: 562 (Escherichia coli)

RFPLWQVITPVRRKVILAMALAGLAALTSLGALLFLAWSLRDIRATPDAI
PAWPLGGVIGCVVLTFVLRLQAFNTSHYAAFHLENILRSRLARKALQLPP
GVLQQMGSGSVAKVMLDDVKSLHIFVADSTPLYARAIIMPLATIVILFWL
DWRLAIATLGVLAFGSVVLVLARQRSENMAQRYHKAREQVSAAVIEFVQA
MPVVRTFDSGSTSFLRYQRALEEWVDVLKTWYRKAGFSARFSFSILNPLP
TLFVLIWSGYGLLHYGSFDFIAWVAVLLLGSGMAEAVMPMMMLNNLVAQT
RLSIQRIYQVLAMPELSLPQSDQQPQEASITFEQVSFHYPQARTGAALQE
VSFHVPAGQIVALVGPSGAGKSTVARLLLRYADPDKGHIRIGGVDLRDMQ
TDTLMKQLSFVFQDNFLFADTIANNIRLGAPDTPLEAVIAAARVAQAHDF
ISALPEGYNTRVGERGVFLSGGQRQRITIARALLQDRPILVLDEATAFAD
PENEAALIKALAAAMRGRTVIMVAHRLSMVTQADVILLFSDGQLREMGNH
TQLLAQGGLYQRLWQHYQQAQ

Ligand information

• Ligand ID: MG
• InChI: InChI=1S/Mg/q+2
• InChIKey: JLVVSXFLKOJNIY-UHFFFAOYSA-N
• SMILES:
  ACDLabs 10.04
  OpenEye OEToolkits 1.5.0: [Mg+2]
  CACTVS 3.341: [Mg++]
• Formula: Mg
• Name: MAGNESIUM ION
• DrugBank: DB01378
• PDB chain: 8vsi Chain A Residue 701

Receptor-Ligand Complex Structure

Structure summary

• PDB: 8vsi Mechanistic Insights Revealed by YbtPQ in the Occluded State.
• Resolution: 3.1 Å
• Binding residue (original residue number in PDB): S384 Q425
• Binding residue (residue number reindexed from 1): S372 Q413
• Annotation score: 1

Enzymatic activity

• Enzyme Commision number: 3.6.3.-

Gene Ontology

Molecular Function

• GO:0005524 ATP binding
• GO:0016787 hydrolase activity
• GO:0016887 ATP hydrolysis activity
• GO:0034040 ATPase-coupled lipid transmembrane transporter activity
• GO:0140359 ABC-type transporter activity

Biological Process

• GO:0006869 lipid transport
• GO:0055085 transmembrane transport

Cellular Component

• GO:0016020 membrane

External links

• PDB: RCSB:8vsi, PDBe:8vsi, PDBj:8vsi
• PDBsum: 8vsi
• PubMed: 38540742
• UniProt: A0A1D7Q186