Structure of PDB 8vi8 Chain A Binding Site BS01
Receptor Information
>8vi8 Chain A (length=227) Species:
562
(Escherichia coli) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SNAADKKLVVATDTAFVPFEFKQGDIYVGFDVDLWAAIAKELKLDYELKP
MDFSGIIPALQTKNVDLALAGITICDERKKAIDFSDGYYKSGLLVMVKAN
NNDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYMELG
TNRADAVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGSDELR
DKVNGALKTLRENGTYNEIYKKWFGTE
Ligand information
Ligand ID
X5Z
InChI
InChI=1S/C7H7N.2C4H8N2O2.Co.N3/c1-2-7-3-5-8-6-4-7;2*1-3(5-7)4(2)6-8;;1-3-2/h2-6H,1H2;2*7-8H,1-2H3;;/q;2*-2;+6;-1/b;2*4-3-;;
InChIKey
KKXSWROVWVQWSY-GLPMUSQESA-N
SMILES
Software
SMILES
ACDLabs 12.01
C=Cc1cc[n+](cc1)[Co]12(\N=[N+]=[N-])(N(O)C(C)=C(C)N1O)N(O)C(C)=C(C)N2O
CACTVS 3.385
CC1=C(C)N(O)[Co]2(N=[N+]=[N-])(N1O)(N(O)C(=C(C)N2O)C)[n+]3ccc(C=C)cc3
OpenEye OEToolkits 2.0.7
CC1=C(N([Co]2(N1O)(N(C(=C(N2O)C)C)O)(N=[N+]=[N-])[n+]3ccc(cc3)C=C)O)C
Formula
C15 H23 Co N8 O4
Name
AZIDOBIS (DIMETHYLGLYOXIMATO) PYRIDINECOBALT
ChEMBL
DrugBank
ZINC
PDB chain
8vi8 Chain A Residue 301 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8vi8
Conformation-Dependent Hydrogen-Bonding Interactions in a Switchable Artificial Metalloprotein.
Resolution
3.21 Å
Binding residue
(original residue number in PDB)
C72 D73 E74 Q183
Binding residue
(residue number reindexed from 1)
C75 D76 E77 Q186
Annotation score
1
External links
PDB
RCSB:8vi8
,
PDBe:8vi8
,
PDBj:8vi8
PDBsum
8vi8
PubMed
39088332
UniProt
C3THM2
[
Back to BioLiP
]