Structure of PDB 8uqz Chain A Binding Site BS01

Receptor Information
>8uqz Chain A (length=316) Species: 293 (Brevundimonas diminuta) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DRINTVRGPITISEVGFTLTHEHICGSSAGFLRAWPEFFGSREALVEKAV
RGLRRARAAGVRTIVDVSTFDLGRDVRLLAEVSRAADVHIVAATGVWLDP
PLSIRMRSVEELTQFFLREIQYGIEDTGIRAGIIKVAITGKVTPFQELVL
RAAARASLATGVPVITHTAGSQRGGEQQAAIFESEGLSPSRVCIGHSDET
DDLSYLTALAARGYLIGLDRIPHSARSWQTRALLIKALIDQGYMKQILVS
NDWLFGISSYVTNFMDVMDSVNPDGMAFIPLRVIPFLREKGIPQETLAGI
TVTNPARFLSPTLRAS
Ligand information
Ligand IDGD3
InChIInChI=1S/Gd/q+3
InChIKeyRJOJUSXNYCILHH-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0		[Gd+3]
FormulaGd
NameGADOLINIUM ION
ChEMBL
DrugBankDB14578
ZINC
PDB chain8uqz Chain A Residue 403 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8uqz Mononuclear binding and catalytic activity of europium(III) and gadolinium(III) at the active site of the model metalloenzyme phosphotriesterase.
Resolution1.61 Å
Binding residue
(original residue number in PDB)		H55 H57 D301
Binding residue
(residue number reindexed from 1)		H21 H23 D252
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008270 zinc ion binding
GO:0016788 hydrolase activity, acting on ester bonds
GO:0046872 metal ion binding
Biological Process
GO:0009056 catabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:8uqz, PDBe:8uqz, PDBj:8uqz
PDBsum8uqz
PubMed38512071
UniProtA0A060GYS7

[Back to BioLiP]