Structure of PDB 8umm Chain A Binding Site BS01
Receptor Information
>8umm Chain A (length=439) Species:
4577
(Zea mays) [
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GAEEIVLQPIKEISGTVKLPGSKSLSNRILLLAALSEGTTVVDNLLNSED
VHYMLGALRTLGLSVEADKAAKRAVVVGCGGKFPVEEVQLFLGNAGIAMR
SLTAAVTAAGGNATYVLDGVPRMRERPIGDLVVGLKQLGADVDCFLGTDC
PPVRVNGIGGLPGGKVKLSGSISSQYLSALLMAAPLALGDVEIEIIDKLI
SIPYVEMTLRLMERFGVKAEHSDSWDRFYIKGGQKYKSPKNAYVEGDASS
ASYFLAGAAITGGTVTVEGCGTTSLQGDVKFAEVLEMMGARVTWTETSVT
VTGPPREPFGRKHLKAIDVNMNKMPDVAMTLAVVALFADGPTAIRDVASW
RVKETERMVAIRTELTKLGASVEEGPDYCIITPPEKLNVTAIDTYDDHRM
AMAFSLAACAEVPVAIRDPGCTRKTFPDYFDVLSTFVKN
Ligand information
Ligand ID
S3P
InChI
InChI=1S/C7H11O8P/c8-4-1-3(7(10)11)2-5(6(4)9)15-16(12,13)14/h2,4-6,8-9H,1H2,(H,10,11)(H2,12,13,14)/t4-,5-,6+/m1/s1
InChIKey
QYOJSKGCWNAKGW-PBXRRBTRSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
C1C(C(C(C=C1C(=O)O)OP(=O)(O)O)O)O
OpenEye OEToolkits 1.5.0
C1[C@H]([C@@H]([C@@H](C=C1C(=O)O)OP(=O)(O)O)O)O
CACTVS 3.341
O[C@@H]1CC(=C[C@@H](O[P](O)(O)=O)[C@H]1O)C(O)=O
CACTVS 3.341
O[CH]1CC(=C[CH](O[P](O)(O)=O)[CH]1O)C(O)=O
ACDLabs 10.04
O=C(O)C1=CC(OP(=O)(O)O)C(O)C(O)C1
Formula
C7 H11 O8 P
Name
SHIKIMATE-3-PHOSPHATE
ChEMBL
CHEMBL95193
DrugBank
DB04328
ZINC
ZINC000003870237
PDB chain
8umm Chain A Residue 501 [
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Receptor-Ligand Complex Structure
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PDB
8umm
Evolving dual-trait EPSP synthase variants using a synthetic yeast selection system.
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
S25 R29 S178 S179 Q180 S206 Y209 D331 K358
Binding residue
(residue number reindexed from 1)
S24 R28 S173 S174 Q175 S201 Y204 D326 K353
Annotation score
5
External links
PDB
RCSB:8umm
,
PDBe:8umm
,
PDBj:8umm
PDBsum
8umm
PubMed
39159366
UniProt
A0A1D6NVZ6
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