Structure of PDB 8umk Chain A Binding Site BS01
Receptor Information
>8umk Chain A (length=441) Species:
4577
(Zea mays) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
EEIVLQPIKEISGTVKLPGSKSLSNRILLLAALSEGTTVVDNLLNSEDVH
YMLGALRTLGLSVEADKAAKRAVVVGCGGKFPVEDSKEEVQLFLGNAGIA
MRSLTAAVTAAGGNATYVLDGVPRMRERPIGDLVVGLKQLGADVDCFLGT
DCPPVRVNGIGGLPGGKVKLSGSISSQYLSALLMAAPLALGDVEIEIIDK
LISIPYVEMTLRLMERFGVKAEHSDSWDRFYIKGGQKYKSPKNAYVEGDA
SSASYFLAGAAITGGTVTVEGCGTTSLQGDVKFAEVLEMMGAKVTWTETS
VTVTGPPREPFGRKHLKAIDVNMNKMPDVAMTLAVVALFADGPTAIRDVA
SWRVKETERMVAIRTELTKLGASVEEGPDYCIITPPEKLNVTAIDTYDDH
RMAMAFSLAACAEVPVAIRDPGCTRKTFPDYFDVLSTFVKN
Ligand information
Ligand ID
S3P
InChI
InChI=1S/C7H11O8P/c8-4-1-3(7(10)11)2-5(6(4)9)15-16(12,13)14/h2,4-6,8-9H,1H2,(H,10,11)(H2,12,13,14)/t4-,5-,6+/m1/s1
InChIKey
QYOJSKGCWNAKGW-PBXRRBTRSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
C1C(C(C(C=C1C(=O)O)OP(=O)(O)O)O)O
OpenEye OEToolkits 1.5.0
C1[C@H]([C@@H]([C@@H](C=C1C(=O)O)OP(=O)(O)O)O)O
CACTVS 3.341
O[C@@H]1CC(=C[C@@H](O[P](O)(O)=O)[C@H]1O)C(O)=O
CACTVS 3.341
O[CH]1CC(=C[CH](O[P](O)(O)=O)[CH]1O)C(O)=O
ACDLabs 10.04
O=C(O)C1=CC(OP(=O)(O)O)C(O)C(O)C1
Formula
C7 H11 O8 P
Name
SHIKIMATE-3-PHOSPHATE
ChEMBL
CHEMBL95193
DrugBank
DB04328
ZINC
ZINC000003870237
PDB chain
8umk Chain A Residue 501 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8umk
Evolving dual-trait EPSP synthase variants using a synthetic yeast selection system.
Resolution
1.9 Å
Binding residue
(original residue number in PDB)
S25 R29 S178 S179 Q180 S206 Y209 D331 K358
Binding residue
(residue number reindexed from 1)
S22 R26 S175 S176 Q177 S203 Y206 D328 K355
Annotation score
5
External links
PDB
RCSB:8umk
,
PDBe:8umk
,
PDBj:8umk
PDBsum
8umk
PubMed
39159366
UniProt
A0A1D6NVZ6
[
Back to BioLiP
]