Structure of PDB 8uiv Chain A Binding Site BS01
Receptor Information
>8uiv Chain A (length=375) Species:
160488
(Pseudomonas putida KT2440) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GRQKIAIVGAGLGGAAAATLLQQAGFDVEVFEQAPAFTRLGAGIQIGPNV
MKIFRRMGLEQKLELMGSHPDFWFSRDGNTGDYLSRIPLGEFARREYGAA
YITIHRGDLHALQIEAIQPGTVHFGKRLEKIVDEGDQVRLDFADGTHTVA
DIVIGADGIHSKIREELLGAEAPIYSGWVAHRALIRGVNLAQHADVFEPC
VKWWSEDRHMMVYYTTGKRDEYYFVTGVPHEAWDFQGAFVDSSQEEMRAA
FEGYHPTVQKLIDATESITKWPLRNRNPLPLWSRGRLVLLGDACHPMKPH
MAQGACMAIEDAAMLTRCLQETGLSDHRTAFALYEANRKERASQVQSVSN
ANTWLYSQEDPAWVYGYDLYGQQLE
Ligand information
Ligand ID
FAD
InChI
InChI=1S/C27H33N9O15P2/c1-10-3-12-13(4-11(10)2)35(24-18(32-12)25(42)34-27(43)33-24)5-14(37)19(39)15(38)6-48-52(44,45)51-53(46,47)49-7-16-20(40)21(41)26(50-16)36-9-31-17-22(28)29-8-30-23(17)36/h3-4,8-9,14-16,19-21,26,37-41H,5-7H2,1-2H3,(H,44,45)(H,46,47)(H2,28,29,30)(H,34,42,43)/t14-,15+,16+,19-,20+,21+,26+/m0/s1
InChIKey
VWWQXMAJTJZDQX-UYBVJOGSSA-N
SMILES
Software
SMILES
CACTVS 3.341
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[C@H](O)[C@H](O)[C@H](O)CO[P@](O)(=O)O[P@@](O)(=O)OC[C@H]4O[C@H]([C@H](O)[C@@H]4O)n5cnc6c(N)ncnc56)c2cc1C
OpenEye OEToolkits 1.5.0
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)CC(C(C(COP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)n5cnc6c5ncnc6N)O)O)O)O)O
OpenEye OEToolkits 1.5.0
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)C[C@@H]([C@@H]([C@@H](CO[P@@](=O)(O)O[P@](=O)(O)OC[C@@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5ncnc6N)O)O)O)O)O
CACTVS 3.341
Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[CH](O)[CH](O)[CH](O)CO[P](O)(=O)O[P](O)(=O)OC[CH]4O[CH]([CH](O)[CH]4O)n5cnc6c(N)ncnc56)c2cc1C
ACDLabs 10.04
O=C2C3=Nc1cc(c(cc1N(C3=NC(=O)N2)CC(O)C(O)C(O)COP(=O)(O)OP(=O)(O)OCC6OC(n5cnc4c(ncnc45)N)C(O)C6O)C)C
Formula
C27 H33 N9 O15 P2
Name
FLAVIN-ADENINE DINUCLEOTIDE
ChEMBL
CHEMBL1232653
DrugBank
DB03147
ZINC
ZINC000008215434
PDB chain
8uiv Chain A Residue 401 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8uiv
Ligand bound structure of a 6-hydroxynicotinic acid 3-monooxygenase provides mechanistic insights.
Resolution
1.511 Å
Binding residue
(original residue number in PDB)
V10 G11 G15 E34 Q35 I46 Q47 R108 R129 L130 A158 D159 G160 R184 G293 D294 P301 A304 G306 A307 C308
Binding residue
(residue number reindexed from 1)
V8 G9 G13 E32 Q33 I44 Q45 R106 R127 L128 A156 D157 G158 R182 G291 D292 P299 A302 G304 A305 C306
Annotation score
2
Enzymatic activity
Enzyme Commision number
1.14.13.114
: 6-hydroxynicotinate 3-monooxygenase.
Gene Ontology
Molecular Function
GO:0071949
FAD binding
View graph for
Molecular Function
External links
PDB
RCSB:8uiv
,
PDBe:8uiv
,
PDBj:8uiv
PDBsum
8uiv
PubMed
38104959
UniProt
Q88FY2
|6HN3M_PSEPK 6-hydroxynicotinate 3-monooxygenase (Gene Name=nicC)
[
Back to BioLiP
]