Structure of PDB 8u0y Chain A Binding Site BS01
Receptor Information
>8u0y Chain A (length=164) Species:
193556
(Ceramium secundatum) [
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MKSVITTTISAADAAGRFPSSSDLESVQGNIQRAASRLEAAEKLAGNHEA
VVKEAGDACFAKYSYLKNPGEAGDSQEKINKCYRDIDHYMRLINYSLVVG
GTGPLDEWCIAGAREVYRTLNLPSSSYVAAFVFTRDRLCVPRDMSAQAGV
EYGAALDYVINSLC
Ligand information
Ligand ID
PUB
InChI
InChI=1S/C33H42N4O6/c1-7-20-19(6)32(42)37-27(20)14-25-18(5)23(10-12-31(40)41)29(35-25)15-28-22(9-11-30(38)39)17(4)24(34-28)13-26-16(3)21(8-2)33(43)36-26/h15,26-27,35H,7-14H2,1-6H3,(H,36,43)(H,37,42)(H,38,39)(H,40,41)/b28-15-/t26-,27+/m1/s1
InChIKey
KDCCOOGTVSRCHX-YYVBKQGDSA-N
SMILES
Software
SMILES
CACTVS 3.341
CCC1=C(C)C(=O)N[CH]1Cc2[nH]c(C=C3N=C(C[CH]4NC(=O)C(=C4C)CC)C(=C3CCC(O)=O)C)c(CCC(O)=O)c2C
OpenEye OEToolkits 1.5.0
CCC1=C(C(=O)NC1Cc2c(c(c([nH]2)C=C3C(=C(C(=N3)CC4C(=C(C(=O)N4)CC)C)C)CCC(=O)O)CCC(=O)O)C)C
OpenEye OEToolkits 1.5.0
CCC1=C(C(=O)N[C@H]1Cc2c(c(c([nH]2)\C=C/3\C(=C(C(=N3)C[C@@H]4C(=C(C(=O)N4)CC)C)C)CCC(=O)O)CCC(=O)O)C)C
CACTVS 3.341
CCC1=C(C)C(=O)N[C@H]1Cc2[nH]c(\C=C3/N=C(C[C@H]4NC(=O)C(=C4C)CC)C(=C3CCC(O)=O)C)c(CCC(O)=O)c2C
Formula
C33 H42 N4 O6
Name
PHYCOUROBILIN
ChEMBL
DrugBank
ZINC
ZINC000040164449
PDB chain
8u0y Chain A Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
8u0y
Bacterial protein cpx
Resolution
3.0 Å
Binding residue
(original residue number in PDB)
F60 A72 K78 K81 C82 R84 D85 H88 Y89 W108 C109 L120 L122 S126 Y127
Binding residue
(residue number reindexed from 1)
F60 A72 K78 K81 C82 R84 D85 H88 Y89 W108 C109 L120 L122 S126 Y127
Annotation score
4
External links
PDB
RCSB:8u0y
,
PDBe:8u0y
,
PDBj:8u0y
PDBsum
8u0y
PubMed
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