Structure of PDB 8u0j Chain A Binding Site BS01

Receptor Information
>8u0j Chain A (length=569) Species: 666 (Vibrio cholerae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QGPLSTLIEQIRFESEGLYYLVKSKKLPKDHSGYELTTVEIDLAPCAALG
FKQTLSMGTKTFSPLSWFTLENGEVQKKARFATRYQLDDVGKLVSKSIKG
DYIKKPLYSNAKNRIQAIDITKESYSGFQLSKVGILEQFMQDLKQAYGDS
VSVKLQRIPGEKHRFVSDTIVKNHYVGLFDALKEHRLVICDLTENQDTDA
ALTLLHGIEHLDINAEIAEVPIRGALNILIVGNKDTYKSDEEDPYQVYRK
KYQDTVFQSCYPERLWNRQGQPNRHVVEVLLKELLIKLEVHTRKHLIEYP
SGPERCVYYMPQRPKDESSEVRDEPWPVYASKLVGDEWQYTQATQEELED
IELDLGNDKRHVFHGFERSPVIYWPETGDYAIFIDTGIQMLPEFEAVAER
LRELKEGRSQDVPIALLAQFIEENPESKVINKLRAILSEWDDVAPLPFDE
FSTIAYKSSDEKQFYDWLREQGFFLKTSIRGQSEGFFNASLGFFYNREQG
MYFAGGKGSPQSKIETFSHLYLIKHSFDALPEEVENLFDVYHLRHRLPTV
TPYPFKHLREYVEMQRFRS
Ligand information
Receptor-Ligand Complex Structure
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PDB8u0j Plasmid targeting and destruction by the DdmDE bacterial defence system.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		T177 K178 T179 S227 K230 K250 K352 D361 Y363 Q376 S377 C378 Y379 R382 V394 V397 L398 K405 Q507 F635 S636 H637 L661 R662 V668 K674
Binding residue
(residue number reindexed from 1)		T59 K60 T61 S109 K112 K132 K234 D243 Y245 Q258 S259 C260 Y261 R264 V276 V279 L280 K287 Q389 F517 S518 H519 L543 R544 V550 K556
Gene Ontology
Molecular Function
GO:0003674 molecular_function
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8u0j, PDBe:8u0j, PDBj:8u0j
PDBsum8u0j
PubMed38740055
UniProtQ9KR73

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