Structure of PDB 8tzd Chain A Binding Site BS01
Receptor Information
>8tzd Chain A (length=521) Species:
9913
(Bos taurus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ERMCGRMSDFCREHKTTLRYIIWGILIAGYLALVIAACVMNFHRALPLFV
ITVVAIFFVVWDHLMAKYESQIARFLSPGQRLLDSHWFWLKWVIWGCLIL
GVILWLVFDTAKLGQQQLVSFGGLIIYTSLTFLFSKHPTKVYWRPVFWGI
GLQFLLGLLILRTEPGFMAFDWLGKQVQTFLGYSDAGASFVFGEKYTDHF
FAFKVLPIVIFFSTVMSMLYYLGLMQWIIRKVGWVMLVTMGTSPVESVVA
SGNIFIGQTESPLLVRPYLPYVTKSELHAIMTAGFSTIAGSVLGAYISFG
VSSSHLLTASVMSAPAALAISKLFWPETETPKDSRNLLEAATQGASSSIS
LVANIAVNLIAFLALLSFMNSALSWLGNMFDYPQLSFEVICSYVFMPFAF
MMGVDWQDSFMVAKLIGYKTFFNEFVAYQQLSKLISLRQVGGPKFVDGVQ
QYMSMRSEAISTYALCGFANFGSLGIVIGGLTSMAPSRKRDITAGAMRAL
IAGTIACFLTACIAGMLTNTP
Ligand information
Ligand ID
XMO
InChI
InChI=1S/C13H19N3O7/c1-6(2)12(19)22-5-7-9(17)10(18)11(23-7)16-4-3-8(15-21)14-13(16)20/h3-4,6-7,9-11,17-18,21H,5H2,1-2H3,(H,14,15,20)/t7-,9-,10-,11-/m1/s1
InChIKey
HTNPEHXGEKVIHG-QCNRFFRDSA-N
SMILES
Software
SMILES
ACDLabs 12.01
CC(C)C(=O)OCC1OC(N2C=CC(=NC2=O)NO)C(O)C1O
OpenEye OEToolkits 2.0.7
CC(C)C(=O)OCC1C(C(C(O1)N2C=CC(=NC2=O)NO)O)O
OpenEye OEToolkits 2.0.7
CC(C)C(=O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)N2C=CC(=NC2=O)NO)O)O
CACTVS 3.385
CC(C)C(=O)OC[CH]1O[CH]([CH](O)[CH]1O)N2C=CC(=NC2=O)NO
CACTVS 3.385
CC(C)C(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N2C=CC(=NC2=O)NO
Formula
C13 H19 N3 O7
Name
N-hydroxy-5'-O-(2-methylpropanoyl)cytidine;
Molnupiravir
ChEMBL
DrugBank
ZINC
PDB chain
8tzd Chain A Residue 701 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8tzd
Antiviral drug recognition and elevator-type transport motions of CNT3.
Resolution
3.2 Å
Binding residue
(original residue number in PDB)
F289 A378 V381 N524 E525
Binding residue
(residue number reindexed from 1)
F200 A289 V292 N423 E424
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005337
nucleoside transmembrane transporter activity
Biological Process
GO:1901642
nucleoside transmembrane transport
Cellular Component
GO:0016020
membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8tzd
,
PDBe:8tzd
,
PDBj:8tzd
PDBsum
8tzd
PubMed
38418906
UniProt
F1MGR1
[
Back to BioLiP
]