Structure of PDB 8tct Chain A Binding Site BS01

Receptor Information
>8tct Chain A (length=275) Species: 818 (Bacteroides thetaiotaomicron) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AKKEVAIQLYSVRDILNKVDNKDGKCDAAYITLLKNLAKMGYTSVEAANY
NNGKFYDRTPDQFKKDVESAGLKVLSSHCTRGLSKEELASGDFSSSLQWW
DQCIADHKAAGMSYIVAPWMDVPKTLKELDTYCAYYNEIGKRCKQQGMSF
GYHNHAHEFQKVEDKVMYDYMIEHTNPEYVFFQMDVYWVVRGQNSPVDYF
NKYPGRFKMFHIKDHREIGQSGMVGFDAIFKNAKTAGVKHLVAEIESYSM
PVEKSVEVSLDYLLDAPFVKSSYAK
Ligand information
Ligand IDUC6
InChIInChI=1S/C6H10O5/c7-1-4-6(10)5(9)3(8)2-11-4/h3-4,6-8,10H,1-2H2
InChIKeyTWOSIGGTFLLPLQ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7C1[C@H](C(=O)[C@H]([C@@H](O1)CO)O)O
ACDLabs 12.01OC1C(CO)OCC(O)C1=O
CACTVS 3.385OC[C@@H]1OC[C@@H](O)C(=O)[C@H]1O
CACTVS 3.385OC[CH]1OC[CH](O)C(=O)[CH]1O
OpenEye OEToolkits 2.0.7C1C(C(=O)C(C(O1)CO)O)O
FormulaC6 H10 O5
Name1,5-anhydro-D-ribo-hex-3-ulose
ChEMBL
DrugBank
ZINC
PDB chain8tct Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8tct An alternative broad-specificity pathway for glycan breakdown in bacteria
Resolution1.86 Å
Binding residue
(original residue number in PDB)		H107 H182 H184 E273 E275
Binding residue
(residue number reindexed from 1)		H78 H153 H155 E244 E246
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0016853 isomerase activity

View graph for
Molecular Function
External links
PDB RCSB:8tct, PDBe:8tct, PDBj:8tct
PDBsum8tct
PubMed38898276
UniProtQ8A5T2

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