Structure of PDB 8s9u Chain A Binding Site BS01

Receptor Information
>8s9u Chain A (length=768) Species: 1148 (Synechocystis sp. PCC 6803) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MRGIEITITMQSDWHVGTGMGRGELDSVVQRDGDNLPYIPGKTLTGILRD
SCEQVALGLDNGQTRGLWHGWINFIFGDQPALAQGAIEPEPRPALIAIGS
AHLDPKLKAAFQGKKQLQEAIAFMKPGVAIDAITGTAKKDFLRFEEVVRL
GAKLTAEVELNLPDNLSETNKKVIAGILASGAKLTERLGGKRRRGNGRCE
LKFSGYSDQQIQWLKDNYQSVDQPPKYQQNKLQSAGDNPEQQPPWHIIPL
TIKTLSPVVLPARTVGNVVECLDYIPGRYLLGYIHKTLGEYFDVSQAIAA
GDLIITNATIKIDGKAGRATPFCLFGEKLDGGLGKGKGVYNRFQESEPDG
IQLKGERGGYVGQFEQEQRNLPNTGKINSELFTHNTIQDDVQRPTSDVGG
VYSYEAIIAGQTFVAELRLPDSLVKQITSKNKNWQAQLKATIRIGQSKKD
QYGKIEVTSGNSADLPKPTGNNKTLSIWFLSDILLRGDRLNFNATPDDLK
KYLENALDIKLKERSDNDLICIALRSQRTESWQVRWGLPRPSLVGWQAGS
CLIYDIESGTVNAEKLQELMITGIGDRCTEGYGQIGFNDPLLSASLGKLT
AKNPLPTNHPTQDYARLIEKAAWREAIQNKALALASSRAKREEILGIKIM
GKDSQPTMTQLGGFRSVLKRLHSRNNRDIVTGYLTALEQVSNRKEKWSNT
SQGLTKIRNLVTQENLIWNHLDIDFSPLTITQNGVNQLKSELWAEAVRTL
VDAIIRGHKRDLEKAQEN
Ligand information
>8s9u Chain F (length=37) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
acugaaacuguaguagaaccaaucggggucgucaaua
.....................................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8s9u Type III CRISPR-Cas effectors act as protein-assisted ribozymes
Resolution2.77 Å
Binding residue
(original residue number in PDB)
G17 T18 T43 G46 R49 D50 D78 Q79 P80 P93 A94 V128 A129 I130 T136 F141 L142 R143 G189 G190 K191 R192 R193 R194 P261 R278 Y279 H285 S295 I298 H384 N385 T386 I387 Q392 R393 P394 Y402 I444 G445 S447 K448 K449 W532 Q533 V534 R535 R540 R577 E580
Binding residue
(residue number reindexed from 1)
G17 T18 T43 G46 R49 D50 D78 Q79 P80 P93 A94 V128 A129 I130 T136 F141 L142 R143 G189 G190 K191 R192 R193 R194 P261 R278 Y279 H285 S295 I298 H384 N385 T386 I387 Q392 R393 P394 Y402 I444 G445 S447 K448 K449 W532 Q533 V534 R535 R540 R577 E580
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0051607 defense response to virus

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:8s9u, PDBe:8s9u, PDBj:8s9u
PDBsum8s9u
PubMed
UniProtQ6ZED2

[Back to BioLiP]