Structure of PDB 8s9t Chain A Binding Site BS01

Receptor Information
>8s9t Chain A (length=769) Species: 1148 (Synechocystis sp. PCC 6803) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MRGIEITITMQSDWHVGTGMGRGELDSVVQRDGDNLPYIPGKTLTGILRD
SCEQVALGLDNGQTRGLWHGWINFIFGDQPALAQGAIEPEPRPALIAIGS
AHLDPKLKAAFQGKKQLQEAIAFMKPGVAIDAITGTAKKDFLRFEEVVRL
GAKLTAEVELNLPDNLSETNKKVIAGILASGAKLTERLGGKRRRGNGRCE
LKFSGYSDQQIQWLKDNYQSVDQPPKYQQNKLQSAGDNPEQQPPWHIIPL
TIKTLSPVVLPARTVGNVVECLDYIPGRYLLGYIHKTLGEYFDVSQAIAA
GDLIITNATIKIDGKAGRATPFCLFGEKLDGGLGKGKGVYNRFQESEPDG
IQLKGERGGYVGQFEQEQRNLPNTGKINSELFTHNTIQDDVQRPTSDVGG
VYSYEAIIAGQTFVAELRLPDSLVKQITSKNKNWQAQLKATIRIGQSKKD
QYGKIEVTSGNSADLPKPTGNNKTLSIWFLSDILLRGDRLNFNATPDDLK
KYLENALDIKLKERSDNDLICIALRSQRTESWQVRWGLPRPSLVGWQAGS
CLIYDIESGTVNAEKLQELMITGIGDRCTEGYGQIGFNDPLLSASLGKLT
AKPSNPLPTNHPTQDYARLIEKAAWREAIQNKALALASSRAKREEILGIK
IMGKDSQPTMTQLGGFRSVLKRLHSRNNRDIVTGYLTALEQVSNRKEKWS
NTSQGLTKIRNLVTQENLIWNHLDIDFSPLTITQNGVNQLKSELWAEAVR
TLVDAIIRGHKRDLEKAQE
Ligand information
>8s9t Chain F (length=37) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
acugaaacuguaguagaaccaaucggggucgucaaua
.....................................
Receptor-Ligand Complex Structure
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PDB8s9t RNA targeting and cleavage by the type III-Dv CRISPR effector complex.
Resolution2.52 Å
Binding residue
(original residue number in PDB)		V16 G17 T18 G19 K42 T43 G46 R49 D50 D78 Q79 P80 P93 A94 G127 V128 A129 I130 T136 A137 L142 R143 G189 G190 K191 R192 R193 R194 L232 P261 Y279 L281 H285 S295 I298 T383 H384 N385 T386 I387 Q392 R393 P394 V401 Y402 I444 G445 S447 K448 K449 W532 Q533 V534 R535 R540 R577 E580
Binding residue
(residue number reindexed from 1)		V16 G17 T18 G19 K42 T43 G46 R49 D50 D78 Q79 P80 P93 A94 G127 V128 A129 I130 T136 A137 L142 R143 G189 G190 K191 R192 R193 R194 L232 P261 Y279 L281 H285 S295 I298 T383 H384 N385 T386 I387 Q392 R393 P394 V401 Y402 I444 G445 S447 K448 K449 W532 Q533 V534 R535 R540 R577 E580
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0051607 defense response to virus

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Molecular Function
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Biological Process
External links
PDB RCSB:8s9t, PDBe:8s9t, PDBj:8s9t
PDBsum8s9t
PubMed38637512
UniProtQ6ZED2

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