Structure of PDB 8qxc Chain A Binding Site BS01

Receptor Information
>8qxc Chain A (length=219) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QVQLKQSGGGLVQPKGSLKLSCAASGFTFNTYAMHWVRQAPGKGLEWVAR
IRSKSSNYATYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVS
ITTRFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDY
FPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYI
CNVNHKPSNTKVDKRVEPK
Ligand information
Ligand IDX5X
InChIInChI=1S/C24H34N4O7S/c1-14(29)26-16(22(32)33)11-7-8-12-25-20(31)18(21-28-19(23(34)35)24(2,3)36-21)27-17(30)13-15-9-5-4-6-10-15/h4-6,9-10,16,18-19,21,28H,7-8,11-13H2,1-3H3,(H,25,31)(H,26,29)(H,27,30)(H,32,33)(H,34,35)/t16-,18+,19-,21+/m0/s1
InChIKeyJXFMICAVKFQPRG-GZMOKQHVSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CC(=O)N[C@@H](CCCCNC(=O)[C@H]([C@@H]1N[C@H](C(S1)(C)C)C(=O)O)NC(=O)Cc2ccccc2)C(=O)O
CACTVS 3.385CC(=O)N[CH](CCCCNC(=O)[CH](NC(=O)Cc1ccccc1)[CH]2N[CH](C(O)=O)C(C)(C)S2)C(O)=O
OpenEye OEToolkits 2.0.7CC(=O)NC(CCCCNC(=O)C(C1NC(C(S1)(C)C)C(=O)O)NC(=O)Cc2ccccc2)C(=O)O
CACTVS 3.385CC(=O)N[C@@H](CCCCNC(=O)[C@@H](NC(=O)Cc1ccccc1)[C@@H]2N[C@@H](C(O)=O)C(C)(C)S2)C(O)=O
FormulaC24 H34 N4 O7 S
Name(2R,4S)-2-[(1R)-2-[[(5S)-5-acetamido-6-oxidanyl-6-oxidanylidene-hexyl]amino]-2-oxidanylidene-1-(2-phenylethanoylamino)ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid;
PenG-Lys
ChEMBL
DrugBank
ZINC
PDB chain8qxc Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8qxc Pharmacologic and immunogenetic factors determine the B cell response to beta-lactam antibiotics
Resolution2.3 Å
Binding residue
(original residue number in PDB)
Y51 A52 H54 R69 R71 S72 I120 T121 T122
Binding residue
(residue number reindexed from 1)
Y32 A33 H35 R50 R52 S53 I101 T102 T103
Annotation score1
External links