Structure of PDB 8qn0 Chain A Binding Site BS01

Receptor Information
>8qn0 Chain A (length=322) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
APLPTSCNPSDMSHGYVTVKPRVRLHFVELGSGPAVCLCHGFPESWYSWR
YQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLG
LSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESI
KANPVFDYQLYFQEPGVAEAELEQNLSRTFKSLFRASDESVLSMHKVCEA
GGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKW
ACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRGHIEDCGHW
TQMDKPTEVNQILIKWLDSDAR
Ligand information
Ligand IDWJ5
InChIInChI=1S/C21H23Cl2N3O3S/c1-14-2-6-19(7-3-14)30(28,29)26-12-16-10-25(11-17(16)13-26)21(27)24-9-15-4-5-18(22)8-20(15)23/h2-8,16-17H,9-13H2,1H3,(H,24,27)/t16-,17+
InChIKeySCQXAOYLXUOAEA-CALCHBBNSA-N
SMILES
SoftwareSMILES
CACTVS 3.385Cc1ccc(cc1)[S](=O)(=O)N2C[CH]3CN(C[CH]3C2)C(=O)NCc4ccc(Cl)cc4Cl
OpenEye OEToolkits 2.0.7Cc1ccc(cc1)S(=O)(=O)N2C[C@H]3CN(C[C@H]3C2)C(=O)NCc4ccc(cc4Cl)Cl
CACTVS 3.385Cc1ccc(cc1)[S](=O)(=O)N2C[C@@H]3CN(C[C@@H]3C2)C(=O)NCc4ccc(Cl)cc4Cl
OpenEye OEToolkits 2.0.7Cc1ccc(cc1)S(=O)(=O)N2CC3CN(CC3C2)C(=O)NCc4ccc(cc4Cl)Cl
FormulaC21 H23 Cl2 N3 O3 S
Name(3~{a}~{R},6~{a}~{S})-~{N}-[(2,4-dichlorophenyl)methyl]-5-(4-methylphenyl)sulfonyl-1,3,3~{a},4,6,6~{a}-hexahydropyrrolo[3,4-c]pyrrole-2-carboxamide;
1''-3'gc(etheno)ADPR
ChEMBL
DrugBank
ZINC
PDB chain8qn0 Chain A Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8qn0 Photosensitization enables Pauson-Khand-type reactions with nitrenes.
Resolution1.49 Å
Binding residue
(original residue number in PDB)
D335 W336 Y383 M419 Y466 V498 L499 H524
Binding residue
(residue number reindexed from 1)
D110 W111 Y158 M194 Y241 V273 L274 H299
Annotation score1
Enzymatic activity
Enzyme Commision number 3.1.3.76: lipid-phosphate phosphatase.
3.3.2.10: soluble epoxide hydrolase.
Gene Ontology
Molecular Function
GO:0003824 catalytic activity

View graph for
Molecular Function
External links
PDB RCSB:8qn0, PDBe:8qn0, PDBj:8qn0
PDBsum8qn0
PubMed38301027
UniProtP34913|HYES_HUMAN Bifunctional epoxide hydrolase 2 (Gene Name=EPHX2)

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