Structure of PDB 8qlp Chain A Binding Site BS01

Receptor Information
>8qlp Chain A (length=412) Species: 1904864 (Bacillales bacterium) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ARNKIFISHAAPDDNDFTKWLALKLIALGYEVWCDVLFFWKVIDKEIREG
AIKFLLATSEIAIKRDGVLKEIAVAEKVKKQLKDDNFIIPLIIDENLSYD
DLPPEIIRLNAVDFKKSWAVGLQDLLKALDDQKVEKNSPDPDKSNALYQQ
IFLHNKGIIEREEIYDSNWFSILSFPKELRFHDYEKLMPKGFDVRELTYP
AVRYKNYLCTFAWEYDFMHQLPKTETYNSSQTIRIPTEEILSGKYDSPFI
GNFECQRLIVQLLNKAFELRMKEKGVREYPMSNKMGYWFEKGKLEKDKFN
KVLLVGKQKDKHWHFGISAAGKLYPFPVLMISSHIFFTKDGKELIESKKI
QHAARRRQGKNWWNDDWRNKLLAFVKYLSDDENSFYLEVGSEEKIYISNE
PVQFVGKVSYNM
Ligand information
>8qlp Chain C (length=21) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ugacggcucuaaucuauuagu
.....................
Receptor-Ligand Complex Structure
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PDB8qlp Target DNA-dependent activation mechanism of the prokaryotic immune system SPARTA.
Resolution3.14 Å
Binding residue
(original residue number in PDB)
K211 E260 M287 K354 H358 R361 R362
Binding residue
(residue number reindexed from 1)
K205 E254 M281 K348 H352 R355 R356
Gene Ontology
--> -->
 
 
UnboundLocalError
Python 3.6.8: /usr/bin/python3
Tue Nov 26 11:07:51 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '8qlp', asym_id = 'A', bs = 'BS01', title = 'Target DNA-dependent activation mechanism of the prokaryotic immune system SPARTA.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='8qlp', asym_id='A', bs='BS01', title='Target DNA-dependent activation mechanism of the prokaryotic immune system SPARTA.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0007165', uniprot = '', pdbid = '8qlp', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0007165', uniprot='', pdbid='8qlp', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>