Structure of PDB 8pfo Chain A Binding Site BS01

Receptor Information

>8pfo Chain A (length=419) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

DDKDFLWPAPNEEQVTCLKMYFGHSSFKPVQWKVIHSVLEEARDNVAVMA
TGKSLCFQYPPVYVGKIGLVISPLISLMEDQVLQLKMSNIPACFLGSAQS
ANVLTDIKLGKYRIVYVTPEYCSGNMGLLQQLEADIGITLIAVDEAHCIS
EWGHDFRDSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLRNPQ
ITCTGFDRPNLYLEVRRKTGNILQDLQPFLVKTSHWEFEGPTIIYCPSRK
MTQQVTGELAKLNLSCGTYHAGMSFSTAKDIHHRFVRDEIQCVIATIAFG
MGINKADIRQVIHYGAPKDMESYYQEIGRAGRDGLQSSCHVLWAPADINL
NRHLLTEIRNAKFRLYKLKMMAKMEKYLHSSRCRRQIILSHFEDKQVQKA
SLGIMGTEKCCDNCRSALD

Ligand information

Ligand ID

InChI

InChI=1S/Zn/q+2

InChIKey

PTFCDOFLOPIGGS-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Zn++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Zn+2]

Formula

Name

ZINC ION

PDB chain

8pfo Chain A Residue 2001 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	8pfo A WRN inhibitor shows anti-tumor efficacy in MSI-high tumor models
Resolution	1.9 Å
Binding residue (original residue number in PDB)	C908 C935 C936 C939
Binding residue (residue number reindexed from 1)	C383 C410 C411 C414
Annotation score	1

Enzymatic activity

Enzyme Commision number

3.1.-.-
5.6.2.4: DNA 3'-5' helicase.

Gene Ontology

	Molecular Function
GO:0003676	nucleic acid binding
GO:0004386	helicase activity
GO:0005524	ATP binding

	Biological Process
GO:0006310	DNA recombination

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Molecular Function

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Biological Process

External links

PDB	RCSB:8pfo, PDBe:8pfo, PDBj:8pfo
PDBsum	8pfo
PubMed	38658754
UniProt	Q14191\|WRN_HUMAN Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN (Gene Name=WRN)

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