Structure of PDB 8p44 Chain A Binding Site BS01

Receptor Information
>8p44 Chain A (length=193) Species: 10244 (Monkeypox virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AMFYAHAFGGYDENLHAFPGISSTVANDVRKYSVVSVYNKKYNIVKNKYM
WCNSQVNKRYIGALLPMFECNEYLQIGDPIHDLEGNQISIVTYRHKNYYA
LSGIGYESLDLCLEGVGIHHHVLETGNAVYGKVQHEYSTIKEKAKEMNAL
KPGPIIDYHVWIGDCVCQVTTVDVHGKEIMRMRFKRGAVLPIP
Ligand information
Ligand IDWY8
InChIInChI=1S/C21H23F2N9O8P2S2/c22-11-8-1-9(31-6-30-14-19(31)27-5-28-20(14)33)15(11)39-42(35,44)37-3-10-16(40-41(34,43)36-2-8)12(23)21(38-10)32-7-29-13-17(24)25-4-26-18(13)32/h4-12,15-16,21H,1-3H2,(H,34,43)(H,35,44)(H2,24,25,26)(H,27,28,33)/t8-,9-,10-,11-,12-,15+,16-,21-,41-,42-/m1/s1
InChIKeyVEWJXUHPZNDXNI-YGFQTLPJSA-N
SMILES
SoftwareSMILES
CACTVS 3.385Nc1ncnc2n(cnc12)[CH]3O[CH]4CO[P](S)(=O)O[CH]5[CH](F)[CH](CO[P](S)(=O)O[CH]4[CH]3F)C[CH]5n6cnc7C(=O)NC=Nc67
OpenEye OEToolkits 2.0.7c1nc(c2c(n1)n(cn2)C3C(C4C(O3)COP(=O)(OC5C(CC(C5F)COP(=O)(O4)S)n6cnc7c6N=CNC7=O)S)F)N
OpenEye OEToolkits 2.0.7c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@H]4[C@H](O3)CO[P@](=O)(O[C@H]5[C@@H](C[C@@H]([C@H]5F)CO[P@](=O)(O4)S)n6cnc7c6N=CNC7=O)S)F)N
CACTVS 3.385Nc1ncnc2n(cnc12)[C@@H]3O[C@@H]4CO[P@](S)(=O)O[C@@H]5[C@H](F)[C@@H](CO[P@](S)(=O)O[C@H]4[C@H]3F)C[C@H]5n6cnc7C(=O)NC=Nc67
FormulaC21 H23 F2 N9 O8 P2 S2
Name9-[(1~{S},3~{R},6~{R},8~{R},9~{R},10~{R},12~{R},15~{R},17~{R},18~{R})-8-(6-aminopurin-9-yl)-9,18-bis(fluoranyl)-3,12-bis(oxidanylidene)-3,12-bis(sulfanyl)-2,4,7,11,13-pentaoxa-3$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{6,10}]octadecan-17-yl]-1~{H}-purin-6-one
ChEMBL
DrugBank
ZINC
PDB chain8p44 Chain A Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8p44 Crystal structure of monkeypox virus poxin in complex with the STING agonist MD1202D
Resolution1.93 Å
Binding residue
(original residue number in PDB)
G127 N128 Y138 Q169 R184
Binding residue
(residue number reindexed from 1)
G126 N127 Y137 Q168 R183
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004518 nuclease activity

View graph for
Molecular Function
External links
PDB RCSB:8p44, PDBe:8p44, PDBj:8p44
PDBsum8p44
PubMed38325369
UniProtA0A7H0DNF0|POXIN_MONPV Poxin-Schlafen (Gene Name=OPG188)

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