Structure of PDB 8oyc Chain A Binding Site BS01

Receptor Information
>8oyc Chain A (length=460) Species: 192952 (Methanosarcina mazei Go1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IMNPKRIRALKSGKQGDGPVVYWMSRDQRAEDNWALLFSRAIAKEANVPV
VVVFCLTDEFLEAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDPGEKI
SRFVKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPFFEVDAHNVVPCWE
ASQKHEYAAHTFRPKLYALLPEFLEEFPELEPNSVTPEETLSDVLETGVK
ALLPERALLKNKDPLFEPWHFEPGEKAAKKVMESFIADRLDSYGALRNDP
TKNMLSNLSPYLHFGQISSQRVVLEVEKAESNPGSKKAFLDEILIWKEIS
DNFCYYNPGYDGFESFPSWAKESLNAHRNDVRSHIYTLEEFEAGKTHDPL
WNASQMELLSTGKMHGYMRMYWAKKILEWSESPEKALEIAICLNDRYELD
GRDPNGYAGIAWSIGGVHDRAWGEREVTGKIRYMSYEGCKRKFDVKLYIE
KYSALDKLAA
Ligand information
Receptor-Ligand Complex Structure
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PDB8oyc Time-resolved crystallography captures light-driven DNA repair
Resolution2.5 Å
Binding residue
(original residue number in PDB)		A160 H161 R164 E301 W305 W421 W431 R441 Y442 M443 S444 E446 G447 R450 K451
Binding residue
(residue number reindexed from 1)		A159 H160 R163 E292 W296 W412 W422 R432 Y433 M434 S435 E437 G438 R441 K442
Enzymatic activity
Enzyme Commision number 4.1.99.3: deoxyribodipyrimidine photo-lyase.
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003904 deoxyribodipyrimidine photo-lyase activity
GO:0016829 lyase activity
Biological Process
GO:0000719 photoreactive repair
GO:0006281 DNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:8oyc, PDBe:8oyc, PDBj:8oyc
PDBsum8oyc
PubMed38033070
UniProtQ8PYK9

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