Structure of PDB 8oy6 Chain A Binding Site BS01

Receptor Information
>8oy6 Chain A (length=458) Species: 192952 (Methanosarcina mazei Go1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IMNPKRIRALKSGKQGDGPVVYWMSRDQRAEDNWALLFSRAIAKEANVPV
VVVFCLTDEFLEAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDPGEKI
SRFVKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPFFEVDAHNVVPCWE
ASQKHEYAAHTFRPKLYALLPEFLEEFPELEPNSVTPTLSDVLETGVKAL
LPERALLKNKDPLFEPWHFEPGEKAAKKVMESFIADRLDSYGALRNDPTK
NMLSNLSPYLHFGQISSQRVVLEVEKAESNPGSKKAFLDEILIWKEISDN
FCYYNPGYDGFESFPSWAKESLNAHRNDVRSHIYTLEEFEAGKTHDPLWN
ASQMELLSTGKMHGYMRMYWAKKILEWSESPEKALEIAICLNDRYELDGR
DPNGYAGIAWSIGGVHDRAWGEREVTGKIRYMSYEGCKRKFDVKLYIEKY
SALDKLAA
Ligand information
Receptor-Ligand Complex Structure
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PDB8oy6 Time-resolved crystallography captures light-driven DNA repair
Resolution2.35 Å
Binding residue
(original residue number in PDB)		A160 H161 R256 E301 W305 Y376 M379 W421 R429 W431 R441 Y442 M443 S444 R450 K451
Binding residue
(residue number reindexed from 1)		A159 H160 R245 E290 W294 Y365 M368 W410 R418 W420 R430 Y431 M432 S433 R439 K440
Enzymatic activity
Enzyme Commision number 4.1.99.3: deoxyribodipyrimidine photo-lyase.
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003904 deoxyribodipyrimidine photo-lyase activity
GO:0016829 lyase activity
Biological Process
GO:0000719 photoreactive repair
GO:0006281 DNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:8oy6, PDBe:8oy6, PDBj:8oy6
PDBsum8oy6
PubMed38033070
UniProtQ8PYK9

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