Structure of PDB 8oy3 Chain A Binding Site BS01

Receptor Information
>8oy3 Chain A (length=453) Species: 192952 (Methanosarcina mazei Go1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MNPKRIRALKSGKQGDGPVVYWMSRDQRAEDNWALLFSRAIAKEANVPVV
VVFCLTDEFLEAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDPGEKIS
RFVKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPFFEVDAHNVVPCWEA
SQKHEYAAHTFRPKLYALLPEFLEEFPELEPNSVTTLSDVLETGVKALLP
ERALLKNKDPLFEPWHFEPGEKAAKKVMESFIADRLDSYGALRNDPTKNM
LSNLSPYLHFGQISSQRVVLEVEKAESNPGSKKAFLDEILIWKEISDNFC
YYNPGYDGFESFPSWAKESLNAHRNDVRSHIYTLEEFEAGKTHDPLWNAS
QMELLSTGKMHGYMRMYWAKKILEWSESPEKALEIAICLNDRYELDGRDP
NGYAGIAWSIGGVHDRAWGEREVTGKIRYMSYEGCKRKFDVKLYIEKYSA
LDK
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8oy3 Time-resolved crystallography captures light-driven DNA repair
Resolution2.16 Å
Binding residue
(original residue number in PDB)		H161 E301 W305 Y376 M379 W421 W431 R441 Y442 M443 S444 R450 K451
Binding residue
(residue number reindexed from 1)		H159 E288 W292 Y363 M366 W408 W418 R428 Y429 M430 S431 R437 K438
Enzymatic activity
Enzyme Commision number 4.1.99.3: deoxyribodipyrimidine photo-lyase.
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003904 deoxyribodipyrimidine photo-lyase activity
GO:0016829 lyase activity
Biological Process
GO:0000719 photoreactive repair
GO:0006281 DNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:8oy3, PDBe:8oy3, PDBj:8oy3
PDBsum8oy3
PubMed38033070
UniProtQ8PYK9

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