Structure of PDB 8onu Chain A Binding Site BS01

Receptor Information
>8onu Chain A (length=133) Species: 470 (Acinetobacter baumannii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GLPSDRNQQISLVADRATYNEKTGLTTYTGNVVIEQGTMKLQADSIVATL
NSKREIQTITAKGRPSKFQQQISADKGIARGEGQTIVYNADTGIITLSGG
AYLYQDGSSIRGNTLKYSMNKGDVEAQGSSSNR
Ligand information
>8onu Chain B (length=16) Species: 29025 (Podisus maculiventris) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
VPITYCNRPTKKCPRY
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8onu Early Molecular Insights into Thanatin Analogues Binding to A. baumannii LptA.
ResolutionN/A
Binding residue
(original residue number in PDB)
G32 L33 P34 D36 N38 Q39 I41 S42 L43 V44 A45 D46 A48 T57 Y59 G61 N62 R85
Binding residue
(residue number reindexed from 1)
G1 L2 P3 D5 N7 Q8 I10 S11 L12 V13 A14 D15 A17 T26 Y28 G30 N31 R54
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0001530 lipopolysaccharide binding
Biological Process
GO:0015920 lipopolysaccharide transport
Cellular Component
GO:0042597 periplasmic space

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8onu, PDBe:8onu, PDBj:8onu
PDBsum8onu
PubMed37298811
UniProtV5VEZ9

[Back to BioLiP]