Structure of PDB 8onh Chain A Binding Site BS01
Receptor Information
>8onh Chain A (length=366) Species:
5702
(Trypanosoma brucei brucei) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
NIGTGDNVLHRAALCGIIELAGKRAKLETALPNFQNELNSILELNMTAAE
PTWLDQFRDKDDRSKPRDLTKQPLPKDTNWADHWTAWAKAALPLLNDETH
QAKLKEYKLAGLQPEKLERARNTIRRLTAEAVAKAQDPTVAESTADLTTE
EDLQKQINQAVYSKDTEPDDDFNGYTAFEGKASTNRQTICGSAVAGSKAT
NAMDALFCVCADDRTNGADAGKACVAGTAPGTGWNPGVTATPTGTMLQKV
RKLCNTHGKTTLSAAAIEGRLTAVGNLLTRGSATSILGSFLATDCSGDQG
SGMCVAYTEVTDAKGTPTKDIPWMQKLDSVRIKLQKHERAVEKLGKPQHD
LKTILTLAKDPAYLQL
Ligand information
Ligand ID
BMA
InChI
InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5+,6-/m1/s1
InChIKey
WQZGKKKJIJFFOK-RWOPYEJCSA-N
SMILES
Software
SMILES
CACTVS 3.341
OC[C@H]1O[C@@H](O)[C@@H](O)[C@@H](O)[C@@H]1O
OpenEye OEToolkits 1.5.0
C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.341
OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.5.0
C([C@@H]1[C@H]([C@@H]([C@@H]([C@@H](O1)O)O)O)O)O
ACDLabs 10.04
OC1C(O)C(OC(O)C1O)CO
Formula
C6 H12 O6
Name
beta-D-mannopyranose;
beta-D-mannose;
D-mannose;
mannose
ChEMBL
DrugBank
ZINC
ZINC000003830679
PDB chain
8onh Chain S Residue 3 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8onh
A structural classification of the variant surface glycoproteins of the African trypanosomey.
Resolution
2.59 Å
Binding residue
(original residue number in PDB)
T101 N102 W103
Binding residue
(residue number reindexed from 1)
T78 N79 W80
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:8onh
,
PDBe:8onh
,
PDBj:8onh
PDBsum
8onh
PubMed
37656766
UniProt
B3GVS7
[
Back to BioLiP
]