Structure of PDB 8oic Chain A Binding Site BS01

Receptor Information
>8oic Chain A (length=340) Species: 5722 (Trichomonas vaginalis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MSIKCALDCDPGHDDLAMIMLAVYSPKLDVQYISTTHGNQTVNKTYQNAR
RTLNLIKRADKIPVYRGYSKPLTRESVAESGLGGVDWSEIDRTMPRNPAL
DILGYKDESELRPDDFFKHLHRLVSAAEDKFDIISTGSETNIAQYLLAYP
EDAKKIRMTTMAGNFMIVGNIMPFAEFNVLIDPEAISNILQSGVDYTFAA
PLDITHTVLVTEKVINDIKAATEPYSPKFTEMIIKLLFFFKDTYRDVFGF
IDPPLHDPVAAFHLIAPEWFEHVRCHVDIETKGEYTYGCCCTNLILKKKD
PTKIVKPDNATVCLKLKEGGHDAFWNQMITVWGEIAKEIG
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain8oic Chain A Residue 400 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8oic A riboside hydrolase that salvages both nucleobases and nicotinamide in the auxotrophic parasite Trichomonas vaginalis.
Resolution2.8 Å
Binding residue
(original residue number in PDB)
D10 D15 T142 D263
Binding residue
(residue number reindexed from 1)
D10 D15 T136 D257
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008477 purine nucleosidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0046872 metal ion binding
Biological Process
GO:0006139 nucleobase-containing compound metabolic process
GO:0006152 purine nucleoside catabolic process
Cellular Component
GO:0005829 cytosol

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:8oic, PDBe:8oic, PDBj:8oic
PDBsum8oic
PubMed37482279
UniProtA2FTT0

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