Structure of PDB 8ki7 Chain A Binding Site BS01

Receptor Information
>8ki7 Chain A (length=2003) Species: 36415 (Tomato spotted wilt virus (strain Bulgarian L3)) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MNIQKIQKLIENGTTLLLSIEDCVGSNYDLALDLHKRNSDEIPEDVIINN
NAKNYETMRELIVKITADGEGLNKGMATVDVKKLSEMVSLFEQKYLETEL
ARHDIFGELISRHLRIKPKQRSEVEIEHALREYLDELNKKSCINKLSDDE
FERINKEYVATNATPDNYVIYKESKNSELCLIIYDWKISVDARTETKTME
KYYKNIWKSFKDIKVNGKPFLEDHPVFVSIVILKPIAGMPITVTSSRVLE
KFEDSPSALHGERIKHARNAKLLNISHVGQIVGTTPTVVRNYYANTQKIK
SEVRGILGDDFGSKDVFFSHWTSKYKERNPTEIAYSEDIERIIDSLVTDE
ITKEEIIHFLFGNFCFHIETMNDQHIADKFKGYQSSCINLKIEPKVDLAD
LKDHLIQKQQIWESLYGKHLEKIMLRIREKKKKEKEIPDITTAFNQNAAE
YEEKYPNCFTNDLSETKTNFSMTWSPSFEKINNAIINKFRESFKSSSRVI
YNSPYSTNKARDITNLVRLCLTELSCDTTKMEKQELEDEIDINTGSIKVE
RTKKSKEWNKQGSCLTRNKNEFCMKETGRENKTIYFKGLAVMNIGMSSKK
RILKKEEIKERISKGHMKKLIRHDNEDSLSWCERIKDSLFVLHNGDIREE
GKITSVYNNYAKNPECLYIQDSVLKTELETCKKINKLCNDLAIYHYSEDM
MQFSKGLMVADRYMTKESFKILTTANTSMMLLAFKGDGMNTGGSGVPYIA
LHIVDEDMSDQFNICYTKEIYSYFRNGSNYIYIMRPQRLNQVRLLSLFKT
PSKVPVCFAQFSKKANEMEKWLKNKDIEKVNVFSMTMTVKQILINIVFSS
VMIGTVTKLSRMGIFDFMRYAGFLPLSDYSNIKEYIRDKFDPDITNVADI
YFVNGIKKLLFRMEDLDIIGGITDLNIKCPITGSTLLTLEDLYNNVYLAI
YMMPKSLHNHVHNLTSLLNVPAEWELKFRKELGFNIFEDIYPKKAMFDDK
DLFSINGALNVKALSDYYLGNIENVGLMRSEIENKEDFLSPCYKISTLKS
SKKCSQSNIISTDEIIECLQNAKIQDIENWKGNNLAIIKGLIRTYNEEKN
RLVEFFEDNCVNSLYLVEKLKEIINSGSITVGKSVTSKFIRNNHPLTVET
YLKTKLYYRNNVTVLKSKKVSEELYDLVKQFHNMMEIDLDSVMNLGKGTE
GKKHTFLQMLEFVMSKAKNVTGSVDFLVSVFEKMQRTKTDREIYLMSMKV
KMMLYFIEHTFKHVAQSDPSEAISISGDNKIRALSTLSLDTITSYNDILN
KNSKKSRLAFLSADQSKWSASDLTYKYVLAIILNPILTTGEASLMIECIL
MYVKLKKVCIPTDIFLNLRKAQGTFGQNETAIGLLTKGLTTNTYPVSMNW
LQGNLNYLSSVYHSCAMKAYHKTLECYKDCDFQTRWIVHSDDNATSLIAS
GEVDKMLTDFSSSSLPEMLFRSIEAHFKSFCITLNPKKSYASSSEVEFIS
ERIVNGAIIPLYCRHLANCCTESSHISYFDDLMSLSIHVTMLLRKGCPNE
VIPFAYGAVQVQALSIYSMLPGEVNDSIRIFKKLGVSLKSNEIPTNMGGW
LTSPIEPLSILGPSSNDQIIYYNVIRDFLNKKSLEEVKDSVSSSSYLQMR
FRELKGKYEKGTLEEKDKKMIFLINLFEKASVSEDSDVLTIGMKFQTMLT
QIIKLPNFINENALNKMSSYKDFSKLYPNLKKNIASSLEMESVHDIMIKN
PETILIAPLNDRDFLLSQLFMYTSPSKRNQLSNQSTEKLALDRVLRSKAR
TKMTYEENMEKKILEMLKFDLDSYCSFKTCVNLVIKDVNFSMLIPILDSA
YPCESRKRDNYNFRWFQTEKWIPVVEGSPGLVVMHAVYGSNYIENLGLKN
IPLTDDSINVLTSTFGTGLIMEDVKSLVKGKDSFETEAFSNSNECQRLVK
ACNYMIAAQNRLLAINTCFTRKSFPFYSKFNLGRGFISNTLALLSTIYSK
EES
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8ki7 Structure of Tomato spotted wilt virus L protein
Resolution3.7 Å
Binding residue
(original residue number in PDB)
K467 M605 N606 M609 K618 K656 D775 G781 S782 R823 P824 Q825 R826 R831 K896 L897 H1015 T1018 N1022 K1191 K1291 F1428 E1432 T1433 I1435
Binding residue
(residue number reindexed from 1)
K467 M592 N593 M596 K605 K618 D737 G743 S744 R785 P786 Q787 R788 R793 K858 L859 H962 T965 N969 K1138 K1238 F1375 E1379 T1380 I1382
External links