Structure of PDB 8khw Chain A Binding Site BS01

Receptor Information
>8khw Chain A (length=582) Species: 329854 (Bacteroides intestinalis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LIMTTEDESVIRSAIQTDGVWKEYHAIMIEEADNILGKPNCQRVILGRRL
LEVSRECLRRTLLLGYAYRMTGEVKYAKRAESELDNAADFVDWNPSHFLD
VAEMTTAMAIGYDWLYNFISDQTKLKIEKAIETKGLNPSLDSQYNSWLYR
NNNWNQVCNGGITLGALAIYDKIPTLADELINRAVQSVKLPMSVYAPDGA
YAEGYSYWGYGTTYNLLLIDALENVMGTDYNLSQEPGFLNTGKFIQNMLL
SDGKSFNYGDCSSSGRVSPAMFWFANRTADKDILWSEKYQFSLSSKKSIR
SYRYAVLALIWGASTSMDNLPKPTQRMWVSSKTTTPVALMRTTWDYQQGL
SIALKGGTAQSGHTHLDAGSFIFISKDTRWSTDLGPQDYNSLESKGIDLW
NKSQESDRWKVFRYNNLAHNTLSFDNKYQNVNGYATITDFSDNENYMYAI
ADLTKIYEGQAKEVKRGVAIVDSHYAAVRDEVKTLGQPTVIRWNMVTEAQ
PAIIGEHTIQLSQNGEKLLLEVESPAKVRMKTWSATSPNSWDAKNPGVTF
VGFEAELRPNTTEVLQVKLIPEGNFDSNKEIM
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain8khw Chain A Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8khw The crystal structure of glycosaminoglycan lyase GAGase VII
Resolution2.4 Å
Binding residue
(original residue number in PDB)
H399 D417 H453
Binding residue
(residue number reindexed from 1)
H365 D383 H419
Annotation score4
External links