Structure of PDB 8khv Chain A Binding Site BS01

Receptor Information
>8khv Chain A (length=579) Species: 1597977 (Spirosoma fluviale) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MPGHPRLLLLSGEEDALKRTISADKTWEKLHQAIVAECDQLVGIEPLKRI
QIGRRLLDKSREALRRIFYLSYAWRMTHQLNYLQRAETELLTIAAFSDWN
PTHFLDVAEMTMAVSIGYDWLYNDLSEQSRSTIKEAILKKGIEPSMDSKY
NSWLRSSNNWNQVCNAGITYGAIAVYEDQPEQSKALISRAVSAVVLPMGD
YKPDGAYPEGYSYWGYGTSFNVMLISALDKLFGNDFGLSAQPGFLKTAGY
LENMTAPSGNAYNYSDSGLSGELQPAMFWFAKKLNDPSLLWVERSRLMNS
NPQNHLRNRLLPAALLWSNGVKVAQMNAPKEAMWVGEGKTPVALMRTSWT
DPAAIFVGMKGGSPGTSHAHMDVGSFVMEADGVRWAMDFGMQEYESLESK
GVDLWNMKQNSQRWQILRYNNFAHNTLSINDELQAVDGKAPLTAHSSSAN
FMNAQVDLSSLYKQSIAKANRGIAVVDKAYVVVQDEIETSPAEATVRWTL
LTSATVKVTGANQAELTKDGKVLTIQVMEPAQIDFKTWPTEPVYDFDAPN
PGTTLVGFEVKLPANTKSVIQVTLTPGSS
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain8khv Chain A Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8khv The crystal structure of glycosaminoglycan lyase GAGase VII
Resolution1.9 Å
Binding residue
(original residue number in PDB)
H403 D421 H457
Binding residue
(residue number reindexed from 1)
H370 D388 H424
Annotation score4
External links