Structure of PDB 8kda Chain A Binding Site BS01
Receptor Information
>8kda Chain A (length=188) Species:
608538
(Hydrogenobacter thermophilus TK-6) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
DTFVLDTSVFTNPDVYHQFEEDQLGAIENFISLASHTNANFFMPTSVYYE
FTKMVSLGDLAPKFELVVRIRSPRKWGLMVPAEFLYEFIEEVRYRINKGL
RIAEEHTKEAGKLAEEEVGRVVNRLREKYREALRAGIIDSKEDVDVLLLS
YELDAILVSGDEGLRKWADRVGIKLIDPKNLRYIMENL
Ligand information
>8kda Chain P (length=73) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
aaggcgcguagcucaguagggagagcgccggcccgacacgccggaggucg
gggguucaaguccccccgcgccu
.<<<<<<<..<<<<........>>>>.<<<...........>>>.....<
<<<<.......>>>>>>>>>>>>
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8kda
Cryo-EM structure of Hydrogenobacter thermophilus minimal protein-only RNase P (HARP) in complex with pre-tRNAs
Resolution
3.19 Å
Binding residue
(original residue number in PDB)
D15 R125 K129 D140 D162 E163
Binding residue
(residue number reindexed from 1)
D14 R124 K128 D139 D161 E162
External links
PDB
RCSB:8kda
,
PDBe:8kda
,
PDBj:8kda
PDBsum
8kda
PubMed
UniProt
D3DIV8
[
Back to BioLiP
]