Structure of PDB 8k9x Chain A Binding Site BS01

Receptor Information
>8k9x Chain A (length=481) Species: 5835 (Plasmodium falciparum CAMP/Malaysia) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DPRLYFENRSKFIQDQKDKGINPYPHKFERTISIPEFIEKYKDLGNGEHL
EDTILNITGRIMRVSAQKLRFFDLVGDGEKIQVLANYSFHNHEKGNFAEC
YDKIRRGDIVGIVGFPGKSKKGELSIFPKETILLSACLHMLPMKYGLKDT
EIRYRQRYLDLLINESSRHTFVTRTKIINFLRNFLNERGFFEVETPMMNL
IANARPFITHHNDLDLDLYLRIATELPLKMLIVGGIDKVYEIGKVFRNEG
IDNTHNPEFTSCEFYWAYADYNDLIKWSEDFFSQLVYHLFGTYKISYNKD
GPENQPIEIDFTPPYPKVSIVEEIEKVTNTILEQPFDSNETIEKMINIIK
EHKIELPNPPTAAKLLDQLASHFIENKYNDKPFFIVEHPQIMSPLAKYHR
TKPGLTERLEMFICGKEVLNAYTELNDPFKQKECFDSAFCTSLEYGLPPT
GGLGLGIDRITMFLTNKNSIKDVILFPTMRP
Ligand information
Ligand IDJUA
InChIInChI=1S/C26H36N8O5S/c1-38-18-11-12-22(39-2)21(16-18)33-26-31-17-30-25(34-26)32-20-9-3-4-10-23(20)40(36,37)15-7-14-29-24(35)19(28)8-5-6-13-27/h3-4,9-12,16-17,19H,5-8,13-15,27-28H2,1-2H3,(H,29,35)(H2,30,31,32,33,34)/t19-/m0/s1
InChIKeyDFDOZFPFRRTBOJ-IBGZPJMESA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7COc1ccc(c(c1)Nc2ncnc(n2)Nc3ccccc3S(=O)(=O)CCCNC(=O)[C@H](CCCCN)N)OC
CACTVS 3.385COc1ccc(OC)c(Nc2ncnc(Nc3ccccc3[S](=O)(=O)CCCNC(=O)[CH](N)CCCCN)n2)c1
OpenEye OEToolkits 2.0.7COc1ccc(c(c1)Nc2ncnc(n2)Nc3ccccc3S(=O)(=O)CCCNC(=O)C(CCCCN)N)OC
CACTVS 3.385COc1ccc(OC)c(Nc2ncnc(Nc3ccccc3[S](=O)(=O)CCCNC(=O)[C@@H](N)CCCCN)n2)c1
FormulaC26 H36 N8 O5 S
Name(2~{S})-2,6-bis(azanyl)-~{N}-[3-[2-[[4-[(2,5-dimethoxyphenyl)amino]-1,3,5-triazin-2-yl]amino]phenyl]sulfonylpropyl]hexanamide
ChEMBL
DrugBank
ZINC
PDB chain8k9x Chain A Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8k9x Structure-guided conversion from an anaplastic lymphoma kinase inhibitor into Plasmodium lysyl-tRNA synthetase selective inhibitors.
Resolution2.35 Å
Binding residue
(original residue number in PDB)
R330 E332 H338 N339 P340 F342 E346 Y348 E500 V501 N503 Y505 G554 G556 R559
Binding residue
(residue number reindexed from 1)
R247 E249 H255 N256 P257 F259 E263 Y265 E417 V418 N420 Y422 G454 G456 R459
Annotation score1
External links