Structure of PDB 8k79 Chain A Binding Site BS01

Receptor Information
>8k79 Chain A (length=264) Species: 9031 (Gallus gallus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KDAWEIPRESLRLEVKLGQGGEVWMGTWNGTTRVAIKTLKPGTMSPEAFL
QEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYL
RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA
RLIEFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR
EVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY
FTSTEPQYQPGENL
Ligand information
Ligand IDIYC
InChIInChI=1S/C20H20FN7O2/c1-3-27-10-13-12(8-22)14(21)4-5-15(13)30-11(2)9-24-20(29)17-18(23)26-28-7-6-16(27)25-19(17)28/h4-7,11H,3,9-10H2,1-2H3,(H2,23,26)(H,24,29)/t11-/m0/s1
InChIKeyUUDPUQDMSHQSKH-NSHDSACASA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CCN1Cc2c(ccc(c2C#N)F)OC(CNC(=O)c3c(nn4c3nc1cc4)N)C
OpenEye OEToolkits 2.0.7CCN1Cc2c(ccc(c2C#N)F)O[C@H](CNC(=O)c3c(nn4c3nc1cc4)N)C
CACTVS 3.385CCN1Cc2c(O[C@@H](C)CNC(=O)c3c(N)nn4ccc1nc34)ccc(F)c2C#N
CACTVS 3.385CCN1Cc2c(O[CH](C)CNC(=O)c3c(N)nn4ccc1nc34)ccc(F)c2C#N
FormulaC20 H20 F N7 O2
NameElzovantinib;
(11S)-16-amino-2-ethyl-6-fluoro-11-methyl-14-oxo-10-oxa-2,13,17,18,21-pentazatetracyclo[13.5.2.04,9.018,22]docosa-1(21),4(9),5,7,15(22),16,19-heptaene-5-carbonitrile;
TPX-0022
ChEMBL
DrugBank
ZINC
PDB chain8k79 Chain A Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8k79 Structural insight into the macrocyclic inhibitor TPX-0022 of c-Met and c-Src.
Resolution2.8 Å
Binding residue
(original residue number in PDB)
V281 A293 T338 M341 N391 L393 A403 D404
Binding residue
(residue number reindexed from 1)
V23 A35 T80 M83 N133 L135 A145 D146
Annotation score1
External links
PDB RCSB:8k79, PDBe:8k79, PDBj:8k79
PDBsum8k79
PubMed38074469
UniProtP00523|SRC_CHICK Proto-oncogene tyrosine-protein kinase Src (Gene Name=SRC)

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