Structure of PDB 8inp Chain A Binding Site BS01

Receptor Information
>8inp Chain A (length=426) Species: 58944 (Iris domestica) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PTTVVLYPSPGMGHLVSMFELAKLLDRHGLSVTVIIVEPGSTAAFIARSS
ASNPSVSFRVLPRPHHEAHAFDLLRLSNPELRRFLLESPPSALVLDYFCG
NALDVSAELRIPAYYFFTSGAGVLSAFLHFPDLHSRTAASFREMGSSPLH
FPGIPPLPADHMPVPMLDRDDPVYESFLYFSKRLKEAEGYIINTFEDLEP
RAVAAISDAALPPNYCIGPLIQGSECLAWLDAQPKRSVVFLCFGSIGLFS
SEQLKEMAVGLERSGQRFLWVVRSPPSPDLERILPEGFLERTEGRGLVVK
SWAPQAAVLEHGSVGGFVTHCGWNSTLEAIASGVPMVAWPMYAEQWMNKV
FLVEEMKLAVPMEGYDKDMVTAEEVERKVRWLMESEGGVELRARTERAKE
RAAASLAEGGKSKVALLEVVERMKRG
Ligand information
Ligand IDUDP
InChIInChI=1S/C9H14N2O12P2/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,10,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
InChIKeyXCCTYIAWTASOJW-XVFCMESISA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.0C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)(O)OP(=O)(O)O)O)O
CACTVS 3.370O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(=O)O[P](O)(O)=O)N2C=CC(=O)NC2=O
CACTVS 3.370O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(=O)O[P](O)(O)=O)N2C=CC(=O)NC2=O
OpenEye OEToolkits 1.7.0C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)O)O)O
ACDLabs 12.01O=P(O)(O)OP(=O)(O)OCC2OC(N1C(=O)NC(=O)C=C1)C(O)C2O
FormulaC9 H14 N2 O12 P2
NameURIDINE-5'-DIPHOSPHATE
ChEMBLCHEMBL130266
DrugBankDB03435
ZINCZINC000004490939
PDB chain8inp Chain A Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8inp Functional characterization and structural basis of a reversible glycosyltransferase involves in plant chemical defence.
Resolution2.12 Å
Binding residue
(original residue number in PDB)		C270 G272 S273 W342 A343 Q345 H360 G362 N364 S365 E368 Y382
Binding residue
(residue number reindexed from 1)		C242 G244 S245 W302 A303 Q305 H320 G322 N324 S325 E328 Y342
Annotation score4
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sun Dec 1 05:01:49 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '8inp', asym_id = 'A', bs = 'BS01', title = 'Functional characterization and structural basis...yltransferase involves in plant chemical defence.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='8inp', asym_id='A', bs='BS01', title='Functional characterization and structural basis...yltransferase involves in plant chemical defence.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0008194,0035251', uniprot = '', pdbid = '8inp', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0008194,0035251', uniprot='', pdbid='8inp', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>