Structure of PDB 8hyh Chain A Binding Site BS01

Receptor Information
>8hyh Chain A (length=366) Species: 1462 (Geobacillus kaustophilus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MIIGVPKEIKNNENRVAITPAGVLSFVQAGHTVLIEKEAGVGSGFNDSDY
ARAGAQIIERAEDVWAQADMVMKVKEPLPSEYRFFRPGLVLFTYLHLAAD
PELTRVLKESGVIAIAYETVQVGRTLPLLTPMSEVAGRMAAQIGAQFLEK
PYGGKGILLGGVPGVARGKVVIIGGGVVGTNAAKVAVGLGADVTIIDLNA
DRLRELDDIFGNQITTLMSNPMNIAEAVAEADLVIGAVLIPKLVTEDMVK
AMKPGSVIVDVAIDQGGIVETSDHVTTHDNPTYVKHGVVHYAVANMPGAV
PRTSTIALTNVTIPYALQIANKGVMQAITDNPALELGVNVANGEITYEAV
ARDLGYRYVPAREALG
Ligand information
Ligand IDNAD
InChIInChI=1S/C21H27N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-4,7-8,10-11,13-16,20-21,29-32H,5-6H2,(H5-,22,23,24,25,33,34,35,36,37)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKeyBAWFJGJZGIEFAR-NNYOXOHSSA-N
SMILES
SoftwareSMILES
CACTVS 3.341NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
CACTVS 3.341NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
OpenEye OEToolkits 1.5.0c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
FormulaC21 H27 N7 O14 P2
NameNICOTINAMIDE-ADENINE-DINUCLEOTIDE
ChEMBLCHEMBL1234613
DrugBankDB14128
ZINC
PDB chain8hyh Chain A Residue 1001 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8hyh Two different alanine dehydrogenases from Geobacillus kaustophilus: Their biochemical characteristics and differential expression in vegetative cells and spores.
Resolution2.39 Å
Binding residue
(original residue number in PDB)		R124 L126 T130 S133 G176 V177 V178 D197 L198 S219 L239 L248
Binding residue
(residue number reindexed from 1)		R124 L126 T130 S133 G176 V177 V178 D197 L198 S219 L239 L243
Annotation score4
Enzymatic activity
Enzyme Commision number 1.4.1.1: alanine dehydrogenase.
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0000286 alanine dehydrogenase activity
GO:0016491 oxidoreductase activity
Biological Process
GO:0006524 alanine catabolic process
GO:0042853 L-alanine catabolic process
Cellular Component
GO:0005886 plasma membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8hyh, PDBe:8hyh, PDBj:8hyh
PDBsum8hyh
PubMed36918121
UniProtQ5KUA3

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