Structure of PDB 8hqv Chain A Binding Site BS01
Receptor Information
>8hqv Chain A (length=300) Species:
307796
(Saccharomyces cerevisiae YJM789) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KLDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSI
QVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR
SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK
DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM
ITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT
LKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLG
Ligand information
>8hqv Chain B (length=7) Species:
31631
(Human coronavirus OC43) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
IKTSHDD
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8hqv
Tighter ER retention of SARS-CoV-2 Omicron spike caused by a constellation of folding disruptive mutations
Resolution
1.398 Å
Binding residue
(original residue number in PDB)
R15 K17 Y33 R59 D98 Y99 R101 D117 F142 L161 D206 R272
Binding residue
(residue number reindexed from 1)
R14 K16 Y32 R58 D97 Y98 R100 D116 F141 L160 D205 R271
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:8hqv
,
PDBe:8hqv
,
PDBj:8hqv
PDBsum
8hqv
PubMed
UniProt
P41811
|COPB2_YEAST Coatomer subunit beta' (Gene Name=SEC27)
[
Back to BioLiP
]
