Structure of PDB 8hpd Chain A Binding Site BS01

Receptor Information
>8hpd Chain A (length=212) Species: 325651 (Bryopsis corticulans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VEFYGPDRALWLGPYSEGAVPSYLTGEFPGDYGWDSAGLSADPETFAANR
ELELIHARWAMLGTVGCLTPEALEKYGGVEFGEAVWFKAGSQIFAEGGLD
YLGNPSLVHAQSILAICWTQVVLMGLAEGYRCSGGPLGEATDPLYPGEAF
DPMGMADDPETFAELKTKEIKNGRLAMFAMFGFFVQSLQTGKGPVECWAE
HIADPVANNGFV
Ligand information
Ligand ID0UR
InChIInChI=1S/C52H76O5/c1-11-12-13-14-15-16-17-18-19-30-50(56)57-38-44(49(55)35-48-43(6)34-46(54)37-52(48,9)10)29-23-28-40(3)25-21-20-24-39(2)26-22-27-41(4)31-32-47-42(5)33-45(53)36-51(47,7)8/h19-33,45-47,53-54H,11-18,34-38H2,1-10H3/b21-20+,26-22+,28-23+,30-19-,32-31+,39-24+,40-25+,41-27+,44-29+/t45-,46+,47-/m0/s1
InChIKeyUERRVASYDCUNEJ-DHYZAJTQSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CCCCCCCCCC=CC(=O)OCC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C=CC1C(=CC(CC1(C)C)O)C)C)C(=O)CC2=C(CC(CC2(C)C)O)C
OpenEye OEToolkits 2.0.7CCCCCCCCC/C=C\C(=O)OC/C(=C\C=C\C(=C\C=C\C=C(/C)\C=C\C=C(/C)\C=C\[C@H]1C(=C[C@@H](CC1(C)C)O)C)\C)/C(=O)CC2=C(C[C@H](CC2(C)C)O)C
CACTVS 3.385CCCCCCCCCC=CC(=O)OCC(=CC=CC(C)=CC=CC=C(C)C=CC=C(C)C=C[CH]1C(=C[CH](O)CC1(C)C)C)C(=O)CC2=C(C)C[CH](O)CC2(C)C
CACTVS 3.385CCCCCCCCC\C=C/C(=O)OC\C(=C/C=C/C(C)=C/C=C/C=C(C)/C=C/C=C(C)/C=C/[C@H]1C(=C[C@H](O)CC1(C)C)C)C(=O)CC2=C(C)C[C@@H](O)CC2(C)C
FormulaC52 H76 O5
NameSiphonein
ChEMBL
DrugBank
ZINC
PDB chain8hpd Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8hpd Structural and functional properties of different types of siphonous LHCII trimers from an intertidal green alga Bryopsis corticulans.
Resolution2.74 Å
Binding residue
(original residue number in PDB)		M61 T64 F150 D151 P152 M153 M155 A179 F183 Q186 P194
Binding residue
(residue number reindexed from 1)		M61 T64 F150 D151 P152 M153 M155 A179 F183 Q186 P194
Annotation score1
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Mon Nov 25 00:14:12 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '8hpd', asym_id = 'A', bs = 'BS01', title = 'Structural and functional properties of differen...m an intertidal green alga Bryopsis corticulans. '
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='8hpd', asym_id='A', bs='BS01', title='Structural and functional properties of differen...m an intertidal green alga Bryopsis corticulans. ')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0009765,0016020', uniprot = '', pdbid = '8hpd', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0009765,0016020', uniprot='', pdbid='8hpd', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>