Structure of PDB 8gw5 Chain A Binding Site BS01

Receptor Information
>8gw5 Chain A (length=99) Species: 681288 (Staphylococcus aureus subsp. aureus ED98) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFEADFINCVVFRRQ
ADNVNNYLSKGSLAGVDGRLQSRNYENQEGRRVFVTEVVCDSVQFLEPK
Ligand information
Ligand IDGOL
InChIInChI=1S/C3H8O3/c4-1-3(6)2-5/h3-6H,1-2H2
InChIKeyPEDCQBHIVMGVHV-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.0C(C(CO)O)O
ACDLabs 12.01
CACTVS 3.370
OCC(O)CO
FormulaC3 H8 O3
NameGLYCEROL;
GLYCERIN;
PROPANE-1,2,3-TRIOL
ChEMBLCHEMBL692
DrugBankDB09462
ZINCZINC000000895048
PDB chain8gw5 Chain A Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8gw5 Crystal structure of SaSsbA complexed with glycerol
Resolution1.8 Å
Binding residue
(original residue number in PDB)
S79 F91 V92 T93
Binding residue
(residue number reindexed from 1)
S72 F84 V85 T86
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003697 single-stranded DNA binding
Biological Process
GO:0006260 DNA replication

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Molecular Function

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Biological Process
External links
PDB RCSB:8gw5, PDBe:8gw5, PDBj:8gw5
PDBsum8gw5
PubMed37834349
UniProtA0A0D1JHQ1

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