Structure of PDB 8gna Chain A Binding Site BS01 |
| >8gna Chain A (length=1188) Species: 237368 (Candidatus Scalindua brodae)
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MNITVELTFFEPYRLVEWFDWDARKKSHSAMRGQAFAQWTWKGRTAGKSF
ITGTLVRSAVIKAVEELLSLNNGKWEGVPCCNGSFQTDKKPSFLRKRHTL
QWQANICDKEEACPFCILLGRFDNAGKERNKDYDIHFSNFDLDDLRLVDI
ASGRILNRVDFDTGKAKDYFRTWEADYETYGTYTGRITLRNEHAKKLLLA
SLGFVDKLCGALCRIEVIHNDELRKQAEVIVEAFKQNDKLEKIRILADAI
RTLRLHGEGVIEKDELPDGKEERDKGHHLWDIKVQGTALRTKLKELWQSN
KDIGWRKFTEMLGSNLYLIYKKETSDLFIPVTPPEGIETKEWIIVGRLKA
ATPFYFGVQQPSDSIPGEHASFNILLDKENRYRIPRSALRGALRRDLRTA
FGSGCNVSLGGQILCNCKVCIEMRRITLKDSVSDFSEPPEIRYRIAKNPG
TATVEDGSLFDIEVGPEGLTFPFVLRYRGHKFPEQLSSVIRYWEENDGKN
GMAWLGGLDSTGKGRFALKDIKIFEWDLNQKINEYIKERGMRGKEKELLE
MLPDGLIPYKFFEERECLFPYKENLKPQWSEVQYTIEVGSPLLTADTISA
LTEPGNRAAIAYKKRVYNDGNNAIEPEPRFAVKSETHRGIFRTAVGRRTG
DLGKEDHEDCTCDMCIIFGNEHESSKIRFEDLELINGNEFEKLEKHIDHV
AIDRFTGGALDKAKFDTYPLAGSPKKPLKLKGRFWIKKGFSGDHKLLITT
ALSDIRDGLYPLGSKGGVGYGWVAGISIDDNVPDDFKEMIINNDYVHPGH
QSPKQDNIYYPHYFLDSGSKVYREKDIITHEEFTEELLSGKINCKLETLT
PLIIPDTSDENGLKLQGNKPGHKNYKFFNINGELMIPGSELRGMLRTHFE
ALTKSCFAIFGEDSTLKTLGGKLDKALHPCTGLSDGLCPGCHLFGTTDYK
GRVKFGFAKYENGPEWLITRGNNPERSLTLGVLESPRPAFSIPDDESEIP
GRKFYLHHNGWRIIRQKQLEIRETVQPERNVTTEVMDKGNVFSFDVRFEN
LREWELGLLLQSLDPGKNIAHKLGKGKPYGFGSVKIKIDSLHTFKIKRVP
QSDIREYINKGYQKLIEWLPQWHVIPHIDKLYKLLWVPFLLEPDVRYPVL
NEESKGDYTYKKLGDKDNLPYKTRVKGLTTPWSPWNPF |
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| PDB | 8gna Target RNA-guided protease activity in type III-E CRISPR-Cas system. |
| Resolution | 2.8 Å |
Binding residue
(original residue number in PDB) | E16 R19 W23 R37 Q39 A40 F41 T45 K47 K55 F57 T59 G60 T61 L62 R64 S65 S91 F92 Q93 T94 K101 P102 S103 F104 L105 R106 K107 R108 L133 G134 R135 G140 K141 E144 Y149 H152 F153 S154 N155 D157 R176 I177 L178 N179 R180 V181 G186 A188 D190 Y191 F192 K229 G232 D400 G431 R472 S473 A474 R476 G477 R480 R481 S494 L495 G496 G497 L500 R510 T513 L514 Y529 R530 I531 A532 K533 T539 V540 S544 L545 F546 G592 G593 L594 S596 T684 A685 I688 E725 T726 R728 G729 I730 R732 T733 N760 E761 S765 D788 H789 V790 A791 I792 R794 G797 A799 K804 F805 G853 S854 K855 Y922 P967 S1001 E1002 R1004 G1005 R1008 I1021 G1421 T1422 Y1425 K1426 V1458 L1459 E1460 S1461 P1462 R1463 F1466 K1479 Y1481 G1550 K1551 K1553 P1554 Y1645 L1648 Y1663 |
Binding residue
(residue number reindexed from 1) | E11 R14 W18 R32 Q34 A35 F36 T40 K42 K48 F50 T52 G53 T54 L55 R57 S58 S84 F85 Q86 T87 K90 P91 S92 F93 L94 R95 K96 R97 L119 G120 R121 G126 K127 E128 Y133 H136 F137 S138 N139 D141 R154 I155 L156 N157 R158 V159 G164 A166 D168 Y169 F170 K207 G210 D326 G357 R386 S387 A388 R390 G391 R394 R395 S408 L409 G410 G411 L414 R424 T427 L428 Y443 R444 I445 A446 K447 T453 V454 S458 L459 F460 G506 G507 L508 S510 T594 A595 I598 E635 T636 R638 G639 I640 R642 T643 N670 E671 S675 D698 H699 V700 A701 I702 R704 G707 A709 K714 F715 G763 S764 K765 Y810 P855 S889 E890 R892 G893 R896 I909 G945 T946 Y949 K950 V982 L983 E984 S985 P986 R987 F990 K1003 Y1005 G1074 K1075 K1077 P1078 Y1147 L1150 Y1160 |
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