Structure of PDB 8gdv Chain A Binding Site BS01
Receptor Information
>8gdv Chain A (length=198) Species:
11676
(Human immunodeficiency virus 1) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PIVQQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQDLNT
MLNTVGGHQAAIQMLKETINEEAAEWDRLHPPRGSDIAGTTSTLQEQIGW
MTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDR
FYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKGPGATLEEMTAC
Ligand information
>8gdv Chain M (length=14) Species:
9606
(Homo sapiens) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
PVLFPGQPFGQPPL
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8gdv
Structure of M66I mutant of disulfide stabilized HIV-1 CA hexamer in complex with CPSF6 peptide and IP6
Resolution
3.3 Å
Binding residue
(original residue number in PDB)
N53 L56 N57 I66 Q67 K70 N74 S102 T107
Binding residue
(residue number reindexed from 1)
N49 L52 N53 I62 Q63 K66 N70 S85 T90
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Biological Process
GO:0016032
viral process
View graph for
Biological Process
External links
PDB
RCSB:8gdv
,
PDBe:8gdv
,
PDBj:8gdv
PDBsum
8gdv
PubMed
UniProt
P12493
|GAG_HV1N5 Gag polyprotein (Gene Name=gag)
[
Back to BioLiP
]