Structure of PDB 8g8d Chain A Binding Site BS01

Receptor Information
>8g8d Chain A (length=230) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QVQLVQSGSELKKPGASVKVSCKASGYTFNNYAMNWVRQAPGQGLEWMGW
INTNTGNPTYGQGFTGRFVFSLDTSVSTAYLQISSLKTEDTAVYYCARFR
VAPAAQRGYFYYYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTA
ALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPS
SSLGTQTYICNVNHKPSNTKVDKKVEPKSC
Ligand information
>8g8d Chain C (length=29) Species: 11676 (Human immunodeficiency virus 1) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
KNEQELLELDKWASLWNWFDITNWLWYIR
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8g8d Vaccine induction of heterologous HIV-1 neutralizing antibody B cell lineages in humans
Resolution2.02 Å
Binding residue
(original residue number in PDB)		N30 N31 Y32 A33 W50 N52 T52A N53 R96 V97 G100D Y100E F100F Y100H
Binding residue
(residue number reindexed from 1)		N30 N31 Y32 A33 W50 N52 T53 N54 R100 V101 G108 Y109 F110 Y112
External links
PDB RCSB:8g8d, PDBe:8g8d, PDBj:8g8d
PDBsum8g8d
PubMed38761800
UniProtP0DOX5|IGG1_HUMAN Immunoglobulin gamma-1 heavy chain

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