Structure of PDB 8g20 Chain A Binding Site BS01
Receptor Information
>8g20 Chain A (length=358) Species:
7955
(Danio rerio) [
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SPITGLVYDQRMMLHHNMWDSHHPELPQRISRIFSRHEELRLLSRCHRIP
ARLATEEELALCHSSKHISIIKSSEHMKPRDLNRLGDEYNSIFISNESYT
CALLAAGSCFNSAQAILTGQVRNAVAIVRPPGHHAEKDTACGFCFFNTAA
LTARYAQSITRESLRVLIVDWDVHHGNGTQHIFEEDDSVLYISLHRYEDG
AFFPNSEDANYDKVGLGKGRGYNVNIPWNGGKMGDPEYMAAFHHLVMPIA
REFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLAAGRVLII
LEGGYNLTSISESMSMCTSMLLGDSPPSLDHLTPLKTSATVSINNVLRAH
APFWSSLR
Ligand information
Ligand ID
YJ5
InChI
InChI=1S/C17H26N2O3/c1-3-5-7-16(20)19(12-6-4-2)13-14-8-10-15(11-9-14)17(21)18-22/h8-11,22H,3-7,12-13H2,1-2H3,(H,18,21)
InChIKey
RUZXVBRXLWFADZ-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.385
CCCCN(Cc1ccc(cc1)C(=O)NO)C(=O)CCCC
ACDLabs 12.01
OpenEye OEToolkits 2.0.7
CCCCC(=O)N(CCCC)Cc1ccc(cc1)C(=O)NO
Formula
C17 H26 N2 O3
Name
4-[(N-butylpentanamido)methyl]-N-hydroxybenzamide
ChEMBL
DrugBank
ZINC
PDB chain
8g20 Chain A Residue 801 [
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Receptor-Ligand Complex Structure
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PDB
8g20
Development of First-in-Class Dual Sirt2/HDAC6 Inhibitors as Molecular Tools for Dual Inhibition of Tubulin Deacetylation.
Resolution
1.766 Å
Binding residue
(original residue number in PDB)
S531 H573 H574 G582 F583 D612 H614 F643 Y745
Binding residue
(residue number reindexed from 1)
S91 H133 H134 G142 F143 D172 H174 F203 Y305
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:8g20
,
PDBe:8g20
,
PDBj:8g20
PDBsum
8g20
PubMed
37902787
UniProt
F8W4B7
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