Structure of PDB 8fx0 Chain A Binding Site BS01

Receptor Information
>8fx0 Chain A (length=216) Species: 353153 (Trypanosoma cruzi strain CL Brener) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HVVSRNAEGVIVVDGKAYPMAEELVATESVIQRSIKAVAKQIADFYRPLS
HRDTHGGGGVAPISDENPLIIISVLKGSYIFTADMVRYLGDYGLPHVVDF
LRVASYNKMQLLAETQFKALRGKHVLILEDIVDSGKTLRYILDKVQREHQ
PATLKVCVLADKPGGRRVTMQPDFVCLTVPNKYVIGYGFEVNDRFRCFRH
IFTLRPGEARRYPAHL
Ligand information
Ligand IDYC9
InChIInChI=1S/C11H17N4O5P/c16-5-8(1-2-21(18,19)20)12-3-7-4-13-10-9(7)14-6-15-11(10)17/h4,6,8,12-13,16H,1-3,5H2,(H,14,15,17)(H2,18,19,20)/t8-/m1/s1
InChIKeyYYXVNWBGVIIBOW-MRVPVSSYSA-N
SMILES
SoftwareSMILES
CACTVS 3.385OC[C@@H](CC[P](O)(O)=O)NCc1c[nH]c2C(=O)NC=Nc12
CACTVS 3.385OC[CH](CC[P](O)(O)=O)NCc1c[nH]c2C(=O)NC=Nc12
OpenEye OEToolkits 2.0.7c1c(c2c([nH]1)C(=O)NC=N2)CNC(CCP(=O)(O)O)CO
ACDLabs 12.01O=P(O)(O)CCC(CO)NCc1c[NH]c2c1N=CNC2=O
OpenEye OEToolkits 2.0.7c1c(c2c([nH]1)C(=O)NC=N2)CN[C@H](CCP(=O)(O)O)CO
FormulaC11 H17 N4 O5 P
Name[(3R)-4-hydroxy-3-{[(4-oxo-4,5-dihydro-3H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]amino}butyl]phosphonic acid
ChEMBLCHEMBL2414637
DrugBank
ZINCZINC000096282358
PDB chain8fx0 Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8fx0 Kinetic and Structural Characterization of Trypanosoma cruzi Hypoxanthine-Guanine-Xanthine Phosphoribosyltransferases and Repurposing of Transition-State Analogue Inhibitors.
Resolution1.52 Å
Binding residue
(original residue number in PDB)		D145 D148 S149 G150 T152 K177 Y198 V199
Binding residue
(residue number reindexed from 1)		D130 D133 S134 G135 T137 K162 Y183 V184
Annotation score1
Enzymatic activity
Enzyme Commision number 2.4.2.8: hypoxanthine phosphoribosyltransferase.
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0000287 magnesium ion binding
GO:0004422 hypoxanthine phosphoribosyltransferase activity
GO:0016757 glycosyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0006178 guanine salvage
GO:0032263 GMP salvage
GO:0032264 IMP salvage
GO:0046100 hypoxanthine metabolic process
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8fx0, PDBe:8fx0, PDBj:8fx0
PDBsum8fx0
PubMed37418678
UniProtQ4DGA2

[Back to BioLiP]