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Receptor Information

>8f5m Chain A (length=592) Species: 466052 (Oshimavirus P7426) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

TERIGTLLGWNLLEFPKERVRELQSTAEPTEGSYRNILDGLVNLVKEALG
HIPDALIGKDNVVMWPGSTGANFHLPGWRVSDFVRAPSRARTELPTSSLT
LIRGKKVFGDGIVGIFPPMPEIVPSPNGWAQVRMFSRRGNEIFRAWKGVI
VTHPNVKEPLVAFDDGYGVEELGDVLEIHAILLQTQFTAEYTVQGLYYQG
IPGWWRYLDLDFAFPPDKAKLVEAGAPLELLYPIAQYLKLKGPNTGFGGI
LLSPKILPFLGLHGLEDGGLLAYTRRWRPGERVIFNRRPDLPTGQSAVEL
TYLGLSPIADSVIAHEGDIASTGADYDGDIGYLFPTPEKGGLYMPFHGEA
LHRKDLPTKDYESGLHRWAGQVHAAHILGRVEVNTRRLLDVAWANGEDVP
QDYLHAATEMIQVAVDRQKRDIQWPDFDFKSVKDPVMTDFWRLAVPGGKL
TPEGNTPAAKITNRWRAWETLDGYVGHPHMKNDLKPLASKISRVLARGEH
RRPGPVLAALAFALLAPEPRPKEVEDLLTAGLQSGKRHAVYDALVQMGLP
ANQATDHPELWLRLASKEELEAIFKQLGYRPAMEELEEALNA

Ligand ID

InChI

InChI=1S/Mg/q+2

InChIKey

JLVVSXFLKOJNIY-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mg+2]
CACTVS 3.341	[Mg++]

Formula

Name

MAGNESIUM ION

PDB chain

8f5m Chain A Residue 700 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	8f5m Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail.
Resolution	2.4 Å
Binding residue (original residue number in PDB)	D327 D329 D331
Binding residue (residue number reindexed from 1)	D325 D327 D329
Annotation score	4

Enzyme Commision number

	Molecular Function
GO:0046872	metal ion binding

PDB	RCSB:8f5m, PDBe:8f5m, PDBj:8f5m
PDBsum	8f5m
PubMed	38182597
UniProt	A7XXN5

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Structure of PDB 8f5m Chain A Binding Site BS01