Structure of PDB 8ete Chain A Binding Site BS01

Receptor Information
>8ete Chain A (length=310) Species: 216816 (Bifidobacterium longum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
CTGVRFSDDEGNTYFGRNLDWSFSYGETILVTPRGYHYDTVFGAGGKAKP
NAVIGVGVVMADRPMYFDCANEHGLAIAGLNFPGYASFVHEPVEGTENVA
TFEFPLWVARNFDSVDEVEETLRNVTLVSQQESLLHWFIGDGKRSIVVEQ
MADGMHVHHDDVDVLTNQPTFDFHMENLRNYMCVSNEMAEPTSWGKASLT
AWGAGVGMHGIPGDVSSPSRFVRVAYTNAHYPQQNDEAANVSRLFHTLGS
VQMVDGMAKMGDGQFERTLFTSGYSSKTNTYYMNTYDDPAIRSYAMADYD
MDSSELISVA
Ligand information
Ligand IDWU5
InChIInChI=1S/C25H41FO2/c1-16(4-6-19(28)15-26)21-8-9-22-20-7-5-17-14-18(27)10-12-24(17,2)23(20)11-13-25(21,22)3/h16-18,20-23,27H,4-15H2,1-3H3/t16-,17-,18-,20+,21-,22+,23+,24+,25-/m1/s1
InChIKeyYECICDGDDQGLJC-QIAJLKNUSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7C[C@H](CCC(=O)CF)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC[C@H]4[C@@]3(CC[C@H](C4)O)C)C
OpenEye OEToolkits 2.0.7CC(CCC(=O)CF)C1CCC2C1(CCC3C2CCC4C3(CCC(C4)O)C)C
ACDLabs 12.01FCC(=O)CCC(C)C1CCC2C3CCC4CC(O)CCC4(C)C3CCC12C
CACTVS 3.385C[CH](CCC(=O)CF)[CH]1CC[CH]2[CH]3CC[CH]4C[CH](O)CC[C]4(C)[CH]3CC[C]12C
CACTVS 3.385C[C@H](CCC(=O)CF)[C@H]1CC[C@H]2[C@@H]3CC[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@]12C
FormulaC25 H41 F O2
Name(5R)-1-fluoro-5-[(1R,3aS,3bR,5aR,7R,9aS,9bS,11aR)-7-hydroxy-9a,11a-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-1-yl]hexan-2-one (non-preferred name)
ChEMBL
DrugBank
ZINC
PDB chain8ete Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8ete Structural diversity of bile salt hydrolases reveals rationale for substrate selectivity
Resolution2.3 Å
Binding residue
(original residue number in PDB)
C2 Y26 F68 N82 F103 S139
Binding residue
(residue number reindexed from 1)
C1 Y25 F67 N81 F102 S133
Annotation score3
Enzymatic activity
Enzyme Commision number 2.3.1.-
3.5.1.-
3.5.1.24: choloylglycine hydrolase.
3.5.1.74: chenodeoxycholoyltaurine hydrolase.
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0016740 transferase activity
GO:0016787 hydrolase activity
GO:0045302 choloylglycine hydrolase activity
GO:0047742 chenodeoxycholoyltaurine hydrolase activity
Biological Process
GO:0006629 lipid metabolic process
GO:0006699 bile acid biosynthetic process
Cellular Component
GO:0009274 peptidoglycan-based cell wall

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:8ete, PDBe:8ete, PDBj:8ete
PDBsum8ete
PubMed
UniProtQ9KK62|CBH_BIFLN Bile salt hydrolase/transferase (Gene Name=bsh)

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