Structure of PDB 8edk Chain A Binding Site BS01

Receptor Information
>8edk Chain A (length=412) Species: 6239 (Caenorhabditis elegans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DHDPCHDHTGRPVRCVPEFINAAFGKPVIASDTCGTNRPDKYCTVKREQC
DTCDARNHFQSHPASLLTDLNSIGNMTCWVSTPSLSPQNVSLTLSLGKKF
ELTYVSMHFCSRLPDSMALYKSADFGKTWTPFQFYSSECRRIFGRDPDVS
ITKSNEQEAVCTASHIMGPGGNRVAFPFLENRPSAQNFENSPVLQDWVTA
TDIKVVFSRLSPDQAETDDEVKQRYFYSMGELAVGGRCKCNGHASRCIFD
KMGRYTCDCKHNTAGTECEMCKPFHYDRPWGRATANSANSCVACNCNQHA
KRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTH
RKACKSCGCHPVGSLGKSCNQSSGQCVCKPGVTGTTCNRCAKGYQQSRST
VTPCIKIPHHHH
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain8edk Chain A Residue 803 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8edk Structure of C. elegans UNC-6/Netrin LamN and 3 EGF Domains
Resolution2.5 Å
Binding residue
(original residue number in PDB)		L105 D108 N110 T116 G283
Binding residue
(residue number reindexed from 1)		L66 D69 N71 T77 G230
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:8edk, PDBe:8edk, PDBj:8edk
PDBsum8edk
PubMed38363837
UniProtP34710|UNC6_CAEEL Netrin unc-6 (Gene Name=unc-6)

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