Structure of PDB 8dqq Chain A Binding Site BS01
Receptor Information
>8dqq Chain A (length=430) Species:
3702
(Arabidopsis thaliana) [
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ATLEITDIALVQPSHQPLSNDQTLSLSHLDNDNNLHVSFRYLRVYSSESP
SAVVSASLATALVHYYPLAGSLRRSASDNRFELLCSAGQSVPLVNATVNC
TLESVGYLDGPGFVERLVPDPTREEGMVNPCILQVTMFQCGGWVLGASIH
HAICDGLGASLFFNAMAELARGATKISIEPVWDRERLLGPREKPWVGAPV
RDFLSLDKDFDPYGQAIGDVKRDCFFVTDDSLDQLKAQLLEKSGLNFTTF
EALGAYIWRAKVRAAKTEEKENVKFVYSINIRRLMNPPLPKGYWGNGCVP
MYAQIKAGELIEQPIWKTAELIKQSKSNTSDEYVRSFIDFQELHHKDGIN
AGTGVTGFTDWRYLGHSTIDFGWGGPVTVLPLSNKLLGSMEPCFFLPYSG
FKVLVNLRESAMPEFKEAMDKFHKGEFALS
Ligand information
Ligand ID
07L
InChI
InChI=1S/C9H6O3/c10-7-3-1-6-2-4-9(11)12-8(6)5-7/h1-5,10H
InChIKey
ORHBXUUXSCNDEV-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.2
c1cc2c(cc1O)OC(=O)C=C2
ACDLabs 12.01
O=C2Oc1cc(O)ccc1C=C2
CACTVS 3.370
Oc1ccc2C=CC(=O)Oc2c1
Formula
C9 H6 O3
Name
7-hydroxy-2H-chromen-2-one;
7-hydroxycoumarin
ChEMBL
CHEMBL51628
DrugBank
ZINC
ZINC000000058111
PDB chain
8dqq Chain A Residue 501 [
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Receptor-Ligand Complex Structure
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PDB
8dqq
Emergence of a proton exchange-based isomerization and lactonization mechanism in the plant coumarin synthase COSY.
Resolution
2.33 Å
Binding residue
(original residue number in PDB)
F40 I159 H161 C164 G166 W371
Binding residue
(residue number reindexed from 1)
F39 I149 H151 C154 G156 W361
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0016740
transferase activity
GO:0046872
metal ion binding
Biological Process
GO:0009805
coumarin biosynthetic process
GO:0042617
paclitaxel biosynthetic process
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Molecular Function
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Biological Process
External links
PDB
RCSB:8dqq
,
PDBe:8dqq
,
PDBj:8dqq
PDBsum
8dqq
PubMed
36737607
UniProt
Q8LF28
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