Structure of PDB 8dqo Chain A Binding Site BS01

Receptor Information

>8dqo Chain A (length=436) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

ATLEITDIALVQPSHQPLSNDQTLSLSHLDNDNNLHVSFRYLRVYSSSSE
SPSAVVSASLATALVHYYPLAGSLRRSASDNRFELLCSAGQSVPLVNATV
NCTLESGFVERLVPDPTREEGMVNPCILQVTMFQCGGWVLGASIHHAICD
GLGASLFFNAMAELARGATKISIEPVWDRERLLGPREKPWVGAPVRDFLS
LDKDFDPYGQAIGDVKRDCFFVTDDSLDQLKAQLLEKSGLNFTTFEALGA
YIWRAKVRAAKTEEKENVKFVYSINIRRLMNPPLPKGYWGNGCVPMYAQI
KAGELIEQPIWKTAELIKQSKSNTSDEYVRSFIDFQELHHKDGINAGTGV
TGFTDWRYLGHSTIDFGWGGPVTVLPLSNKLLGSMEPCFFLPYSTDAAAG
SKKDSGFKVLVNLRESAMPEFKEAMDKFHKGEFALS

Ligand information

Ligand ID

InChI

InChI=1S/Ca/q+2

InChIKey

BHPQYMZQTOCNFJ-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Ca++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Ca+2]

Formula

Name

CALCIUM ION

PDB chain

8dqo Chain A Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	8dqo Emergence of a proton exchange-based isomerization and lactonization mechanism in the plant coumarin synthase COSY.
Resolution	1.9 Å
Binding residue (original residue number in PDB)	R211 L214
Binding residue (residue number reindexed from 1)	R196 L199
Annotation score	4

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0016740	transferase activity
GO:0046872	metal ion binding

	Biological Process
GO:0009805	coumarin biosynthetic process
GO:0042617	paclitaxel biosynthetic process

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Molecular Function

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Biological Process

External links

PDB	RCSB:8dqo, PDBe:8dqo, PDBj:8dqo
PDBsum	8dqo
PubMed	36737607
UniProt	Q8LF28

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