Structure of PDB 8des Chain A Binding Site BS01

Receptor Information
>8des Chain A (length=475) Species: 2720215 (Escherichia phage EC6098) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
FGRKVPSNAKSQHNFSVIPSANIQRSVFNRSSGYKTTFDAGYLIPVFLDE
ALPGDTFHLKTSVLARLSTPVVPFMDNLRLDIQYFSVPYRLVWDNWQKFN
GEQKNPGDSTDYLIPQIKAPAGGFPVGSLADYFGVPTGVENISVSALPFR
AYNLIYNEWYRDENLINSAPLPLGDEEETGLANFPLRKRAKRHDYFTSAL
PWPQKGEGVEIGLGVPPSEGGEVVDNLTINSLRQAFQLQRLLERDARGGT
RYIEIIRSHFGVISPDARVQRPEYLGSGSFDININPVLQNSATTDASPQG
NLAAYGVSGGVNRGFSHSFVEHCFVIGLVSVRADLTYQQGIPRMFSRQTR
FDFYWPALAHLGEQAILNKEIYAQGNAKDDEVFGYQERYAEYRYRPSQIT
GKLRSTDPQSLDVWHLAQRFDSLPALNQEFIEENPPMKRVLAVQDEPQFI
MDAFFDLKCVRPMPVYSVPGLIDHF
Ligand information
>8des Chain E (length=10) Species: 2720215 (Escherichia phage EC6098) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ARSMRGGIRL
Receptor-Ligand Complex Structure
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PDB8des Cryo-EM Structure of Gokushovirus Phi EC6098 Reveals a Novel Capsid Architecture for a Single-Scaffolding Protein, Microvirus Assembly System.
Resolution2.6 Å
Binding residue
(original residue number in PDB)		W162 Y163 D165 R192 H196 S201 R338 G340 R342 E345 E454 Q477
Binding residue
(residue number reindexed from 1)		W159 Y160 D162 R189 H193 S198 R247 G249 R251 E254 E363 Q386
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity

View graph for
Molecular Function
External links
PDB RCSB:8des, PDBe:8des, PDBj:8des
PDBsum8des
PubMed36255280
UniProtA0A6G9L6B3

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