Structure of PDB 8dc2 Chain A Binding Site BS01

Receptor Information
>8dc2 Chain A (length=673) Species: 340016 (uncultured virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HKKTESNQIIKTFSFKIKNANGLSLDVLNDAITEYQNYYNICSDWIKDHL
TMKISELYKYIPNEKKNSGYALTLISDEWKDKPMYMMFKKGYPANNRDNA
IYETLNTCNTEHYTGNILNFSDTYYRRFGYVASAISNYVTKISKMSTGSR
SKNISNDSDVDTIMEQVIYEMEHNGWTSVKDWENQMEYLESKTDSNPNFV
YRMTTLYEFYKSHIDEVNSKMETMSIDSLIKFGGCRRKDSKKSMYIMGGS
NTPFDITQIGGNSLNIKFSKNLNVDVFGRYDVIKDNTLLVDIINGHGASF
VLKIINDEIYIDINVSVPFDKKIATTNKVVGIDVNIKHMLLATNILDDGN
VKGYVNIYKEVINDSDFKKVCNSTVMQYFTDFSKFVTFCPLEFDFLFSRV
CNQKGIYNDNSAMEKSFSDVLNKLKWNFIETGDNTKRIYIENVMKLRSQM
KAYAIVKNAYYKQQSEYDFGKSEEFIQEHPFSNTDKGIEILNKLDNISKK
ILGCRNNIIQYSYNLFEINGYDMVSLEKLTSSQFKKKLSKFKDDFFNLMI
KSIHFADIKDYFITLSNNGTAGVSLVPSYFTSQMDSIDHKIYFVNKHKVR
SSQEKHINGLNADYNAARNIAYIMENTDCRNMFMKQSRTDKSLYNKPSYE
TFIKTQGSAVAKLKKEGFVKILD
Ligand information
>8dc2 Chain B (length=51) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uuguuguaacucuuauuuuguauggaguaaacaacuagcaucaccuucac
c
..<<<<<.<<<<.<<<.....>>>>>>>..>>>>>...............
.
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8dc2 Diverse virus-encoded CRISPR-Cas systems include streamlined genome editors.
Resolution2.99 Å
Binding residue
(original residue number in PDB)		I12 I13 K14 T15 K19 N140 K144 C238 R239 R240 K244 S246 N265 F280 G281 R282 Y283 D284 I286 Y313 R402 Q406 S421 K428 W429 R440 I441 E444 K448 S451 K454 Y464 Q467 S468 D471 K489 I493 K496 N499 I500 K503 G506 C507 N510 Q513 K538 K540 Y619 T622 L623 N626 Y713
Binding residue
(residue number reindexed from 1)		I9 I10 K11 T12 K16 N137 K141 C235 R236 R237 K241 S243 N262 F277 G278 R279 Y280 D281 I283 Y310 R399 Q403 S418 K425 W426 R437 I438 E441 K445 S448 K451 Y461 Q464 S465 D468 K486 I490 K493 N496 I497 K500 G503 C504 N507 Q510 K535 K537 Y561 T564 L565 N568 Y644
External links