Structure of PDB 8d5n Chain A Binding Site BS01
Receptor Information
>8d5n Chain A (length=275) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GPHSMRYFETAVSRPGLGEPRYISVGYVDNKEFVRFDSDAENPRYEPQAP
WMEQEGPEYWERITQIAKGQEQWFRVNLRTLLGCYNQSAGGTHTLQWMYG
CDVGSDGRLLRGYEQFAYDGSDYIALNEDLKTWTAADMAAQITRRKWEQA
GAAEYYRAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVT
LRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVP
LGKEQNYTCRVYHEGLPEPLTLRWQ
Ligand information
>8d5n Chain B (length=12) Species:
5811
(Toxoplasma gondii) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
HPGSVNEFDFGC
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8d5n
Peptide Centric V beta Specific Germline Contacts Shape a Specialist T Cell Response.
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
Y7 I63 I66 G69 Q70 W73 N77 L81 C84 W97 Y99 Y123 T143 K146 W147 A150 A152 Y155 Y156 Y159 E163 W167 Y171
Binding residue
(residue number reindexed from 1)
Y7 I63 I66 G69 Q70 W73 N77 L81 C84 W97 Y99 Y123 T143 K146 W147 A150 A152 Y155 Y156 Y159 E163 W167 Y171
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:8d5n
,
PDBe:8d5n
,
PDBj:8d5n
PDBsum
8d5n
PubMed
35967379
UniProt
P01897
|HA1L_MOUSE H-2 class I histocompatibility antigen, L-D alpha chain (Gene Name=H2-L)
[
Back to BioLiP
]
