Structure of PDB 8d5j Chain A Binding Site BS01
Receptor Information
>8d5j Chain A (length=275) Species:
10090
(Mus musculus) [
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MGPHSLRYFVTAVSRPGLGEPRFIAVGYVDDTQFVRFDSDADNPRFEPRA
PWMEQEGPEYWEEQTQRAKSDEQWFRVSLRTAQRYYNQSKGGSHTFQRMF
GCDVGSDWRLLRGYQQFAYDGRDYIALNEDLKTWTAADTAALITRRKWEQ
AGDAEYYRAYLEGECVEWLRRYLELGNETLLRTDSPKAHVTYHPRSQVDV
TLRCWALGFYPADITLTWQLNGEDLTQDMELVETRPAGDGTFQKWAAVVV
PLGKEQNYTCHVHHKGLPEPLTLRW
Ligand information
>8d5j Chain C (length=9) Species:
10090
(Mus musculus) [
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KYLQVASHV
Receptor-Ligand Complex Structure
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PDB
8d5j
The complex of Pre-mRNA-Processing Factor 19 (Prpf19) neoantigen KYLQVASHV Presented by H2-Kd
Resolution
1.95 Å
Binding residue
(original residue number in PDB)
Y7 V9 E62 Q63 R66 S69 D70 W73 V76 T80 Y84 R97 F99 T143 K146 W147 D152 Y155 Y156 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)
Y8 V10 E63 Q64 R67 S70 D71 W74 V77 T81 Y85 R98 F100 T144 K147 W148 D153 Y156 Y157 Y160 W168 Y172
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:8d5j
,
PDBe:8d5j
,
PDBj:8d5j
PDBsum
8d5j
PubMed
UniProt
P01902
|HA1D_MOUSE H-2 class I histocompatibility antigen, K-D alpha chain (Gene Name=H2-K1)
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