Structure of PDB 8d5f Chain A Binding Site BS01
Receptor Information
>8d5f Chain A (length=273) Species:
10090
(Mus musculus) [
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SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARW
IEQEGPEYWERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGC
DVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAG
AAERDRAYLEGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTL
RCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGTFQKWASVVVPL
GKEQKYTCHVEHEGLPEPLTLRW
Ligand information
>8d5f Chain P (length=9) Species:
10090
(Mus musculus) [
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TGAARFDEF
Receptor-Ligand Complex Structure
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PDB
8d5f
The complex of Gtf2b neoantigen TGAARFDEF Presented by H2-Dd
Resolution
2.31 Å
Binding residue
(original residue number in PDB)
Y7 Y59 E63 R66 N70 S73 F74 D77 Y84 W97 W114 F116 Y123 T143 K146 W147 R155 Y159 E163 W167 Y171
Binding residue
(residue number reindexed from 1)
Y6 Y58 E62 R65 N69 S72 F73 D76 Y83 W96 W113 F115 Y122 T142 K145 W146 R154 Y158 E162 W166 Y170
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:8d5f
,
PDBe:8d5f
,
PDBj:8d5f
PDBsum
8d5f
PubMed
38085776
UniProt
P01900
|HA12_MOUSE H-2 class I histocompatibility antigen, D-D alpha chain (Gene Name=H2-D1)
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